Gene VC0395_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0087 
Symbol 
ID5134061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp96277 
End bp96666 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content43% 
IMG OID640530410 
Producthypothetical protein 
Protein accessionYP_001214928 
Protein GI147672352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00321975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTG ATTATTTTGC ACTCGGGTTG CTGATCTTCG TCGCCCTAGT GATTTTCTAC 
GGAATTATTG TTATCCACGA CATCCCTTAC GAAATTGCCA AAGAACGCGA ACACCCACAC
CAAGATGCCA TTCATTATGC AGGCTGGGTA AGTTTATTCA CTTTGCACGC CCTTTGGCCA
TTTTTGTGGA TTTGGGCAAC ATTATGGCGC AAAGAACGTG GCTGGGGATT TCAGAAATTG
GAAGCCGAGC AACATGATAT TCACCATCGA GTCGACGTTT TGATTGATGA AGTAAAACAA
TTGCGTACCG AACTAGAGAC GTTAAAAACT TCTTCTCTCT CAGTACCTAA ATCTACCCCT
GCGGCATCAA CATCAGAGGA GAAGCAATAA
 
Protein sequence
MFLDYFALGL LIFVALVIFY GIIVIHDIPY EIAKEREHPH QDAIHYAGWV SLFTLHALWP 
FLWIWATLWR KERGWGFQKL EAEQHDIHHR VDVLIDEVKQ LRTELETLKT SSLSVPKSTP
AASTSEEKQ