Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0087 |
Symbol | |
ID | 5134061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 96277 |
End bp | 96666 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640530410 |
Product | hypothetical protein |
Protein accession | YP_001214928 |
Protein GI | 147672352 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00321975 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTG ATTATTTTGC ACTCGGGTTG CTGATCTTCG TCGCCCTAGT GATTTTCTAC GGAATTATTG TTATCCACGA CATCCCTTAC GAAATTGCCA AAGAACGCGA ACACCCACAC CAAGATGCCA TTCATTATGC AGGCTGGGTA AGTTTATTCA CTTTGCACGC CCTTTGGCCA TTTTTGTGGA TTTGGGCAAC ATTATGGCGC AAAGAACGTG GCTGGGGATT TCAGAAATTG GAAGCCGAGC AACATGATAT TCACCATCGA GTCGACGTTT TGATTGATGA AGTAAAACAA TTGCGTACCG AACTAGAGAC GTTAAAAACT TCTTCTCTCT CAGTACCTAA ATCTACCCCT GCGGCATCAA CATCAGAGGA GAAGCAATAA
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Protein sequence | MFLDYFALGL LIFVALVIFY GIIVIHDIPY EIAKEREHPH QDAIHYAGWV SLFTLHALWP FLWIWATLWR KERGWGFQKL EAEQHDIHHR VDVLIDEVKQ LRTELETLKT SSLSVPKSTP AASTSEEKQ
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