Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0069 |
Symbol | pstS |
ID | 5134833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 72436 |
End bp | 73335 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640530392 |
Product | phosphate ABC transporter, periplasmic phosphate-binding protein |
Protein accession | YP_001214910 |
Protein GI | 147671713 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | [TIGR02136] phosphate binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.524942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCATATT CACCGCCTAA AGTGAGCCTC GTTCAAGTGA AACACAACGG CAACCCAGCC ACTTATAGGA AATTCGTGAT GAAAAAGACA GTAATCGGTG CTATCGCTCT TATGGGCGCA CTTGCAGTAA CTCCAGTGAT GGCGAAAGAG ACAATTTCAG CTGTGGGCTC AAACAGTGTT ACCCCATTGA TGGAAGTGTT TTCTGAAACC TATGCTAAAA AGAATCCTGA AGTTTTCATT GAAGTACAAG GCCCAGGTTC TTCTGCGGGT ATCAAAGCCG CGAAAAATGG CAGCGCAGAT CTCGGTATGT CATCGCGCAA TCTGAAAGAC TCTGAAAAAG AGCCAACATT AATGGAAGAA GCGATAGCGC TTGACGGTAT CGCAGTCGTA GTTCACCCAA GCAATGCGGT GAAAGGTCTG ACAGCGGAAC AAGTTTCTGA AATCTACAAA GGTGAAATCA CCAACTGGAA ACAAGTTGGC GGTGAAGATA AGCCAATTGT TGCCGTCACT CGTGACACTG CTTCAGGCAC TCGTGGTGCT TTCGAAGACA TCATGTCTCT GAAAAAGAAA ATTGCGGATA AAGAAGTCTC TGCCATTTCT CAACGTGCTC AAGTCGCGAA TGGTAACGGT GCACTAAAAA CCATCGTTGC TTCTAACCCT TATGCAATTG GTTACATTTC GCTCGGTACT GTCGACACAT CAGTTCACGC TCTATCTGTG GATGGTGTAG AAGCGAGCGT TGATAACGTG AAAAACGGTA CTTACAAAGT TTCTCGTCCG TTCCTCGTGC TTTACCAACA AGGTAAACCA TCAGCACAAG CACAGAAATT CTTACAGTGG ATGCTGTCTC CAGAAGCACA AAAGATTGTC GCTGATAAAG GCTACATCGC AGTTAACTAA
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Protein sequence | MSYSPPKVSL VQVKHNGNPA TYRKFVMKKT VIGAIALMGA LAVTPVMAKE TISAVGSNSV TPLMEVFSET YAKKNPEVFI EVQGPGSSAG IKAAKNGSAD LGMSSRNLKD SEKEPTLMEE AIALDGIAVV VHPSNAVKGL TAEQVSEIYK GEITNWKQVG GEDKPIVAVT RDTASGTRGA FEDIMSLKKK IADKEVSAIS QRAQVANGNG ALKTIVASNP YAIGYISLGT VDTSVHALSV DGVEASVDNV KNGTYKVSRP FLVLYQQGKP SAQAQKFLQW MLSPEAQKIV ADKGYIAVN
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