| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0067 |
|---|
| Symbol | pstA-2 |
|---|
| ID | 5134591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 70569 |
|---|
| End bp | 71438 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640530390 |
|---|
| Product | phosphate ABC transporter, permease protein |
|---|
| Protein accession | YP_001214908 |
|---|
| Protein GI | 147672503 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.191661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG ATCGCGTAAA ACTGAAACAA GCGCGTGTGC TCAAAGACAA TATCTTGCGC
ACGTTTATTT GGATTTCTGC GGCGCTGACC GTCGGCTTCT TGTTCTGGAT CATCTGGTAC
ATCTTGTCCA ACGGTCTGCA ACACGTTAAC TGGAAATTCG TTACTGATAA TTACACCCAC
ACGGGCGATG AGCACGGTAT TTTCCCGATG ATTGTCTCGA CCGTGTATAT GGTTGTCGCT
TCGATCGCGG TCGCAGCGCC TATTGGTATC ATGACAGCGA TTTACTTGAC GGAATACGCC
AAAGTCGGCA GCCGTTTGGT CAAAATCATT CGCTTCTGTA CCGAGTCACT GGCGGGGATC
CCTTCGATCA TTTTTGGTCT GTTCGGTATG ACCTTCTTCG TGGCGATTTT GGGCTTAGGC
TTCTCGATTC TTTCCGGTGC ATTAACTCTC AGTATCTTGA TCCTGCCAGT CATTATTCGT
ACCACGGAAG AAGCCTTAAT GGCGGTACCA CAAACCTACC GTGAAGGCTC GTATGGCGTG
GGTGCTTCAA AAATTTACAC CATCCGCCGG CTAATTTTGC CAAGTGCTAT GCCGGGGATT
TTAACTTCTG TCATTTTGAG TATTGGCCGT GTCATTGGTG AATCTGCCCC AGTATTTTTA
ACCGCGGGTA TGGTGGCGCG TATTCCAGAT TCTCTGCTAG ATTCTGGACG CACCTTGACC
GTTCACTTGT ACAAACTGAC CACAGAGCTG TTCACTATTG AAGAATGGAA CCAAGCTTAT
GGCACCGCCA CTGTGCTGAT TGTTGTGGTT TTGCTGATCA ACATGATCAC CAAGCTCATC
GCCAAACGAT TCAATACTGC GACCTATTAA
|
|---|
| Protein sequence | MTMDRVKLKQ ARVLKDNILR TFIWISAALT VGFLFWIIWY ILSNGLQHVN WKFVTDNYTH
TGDEHGIFPM IVSTVYMVVA SIAVAAPIGI MTAIYLTEYA KVGSRLVKII RFCTESLAGI
PSIIFGLFGM TFFVAILGLG FSILSGALTL SILILPVIIR TTEEALMAVP QTYREGSYGV
GASKIYTIRR LILPSAMPGI LTSVILSIGR VIGESAPVFL TAGMVARIPD SLLDSGRTLT
VHLYKLTTEL FTIEEWNQAY GTATVLIVVV LLINMITKLI AKRFNTATY
|
|---|
| |