Gene VC0395_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0045 
Symbol 
ID5135009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp50536 
End bp50892 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content42% 
IMG OID640530368 
Producthypothetical protein 
Protein accessionYP_001214886 
Protein GI147672104 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTAA ATATCAAATC ACCAAGAATA CCCATTAATG ATACTGTTGC CTTACAGCAG 
TTAGAGAGAA TATCAACGAA GTGGGTCACG CATATACTTT GGCATTTAGA CTCTTCTGAG
TCCGCTCGTT TTGGTGAACT TCAATATTCA TTGAATGGCA TTTCAGCAAA AATGTTAAGC
CACAGATTGA AGATGCTTGA AGAGATTGGC TGGGTATGGC GTGAGCAGCA GCCTACCATA
CCCGTGACGG TTTATTACGG TTTGACCAAA TCGGGTCGAG TCGTGGCGAA CGGATTATAT
CGGTGGATAG ATCATGTCGT CGAAAATGAA CGAGAACCAC TTTTAGAAAG TAATTAA
 
Protein sequence
MDVNIKSPRI PINDTVALQQ LERISTKWVT HILWHLDSSE SARFGELQYS LNGISAKMLS 
HRLKMLEEIG WVWREQQPTI PVTVYYGLTK SGRVVANGLY RWIDHVVENE REPLLESN