| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0038 |
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| Symbol | |
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| ID | 5134224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 42833 |
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| End bp | 44389 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640530361 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214879 |
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| Protein GI | 147671764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGG AAAAGACTGT GATTTCAAAA GCACCGATGA GAATCGCGTT TGCCATTCTA
CTCTCACCCT TGATTATTTT TTTATTGGCT CAGCCGCTCT GGGCTCCTCT TGTCGCACAA
CATCTGCTTA ATCAGAAATT TGCTGAGATT AATCAGTACC TAGAACAACG CAATCTGGCT
TTAGACAGTA TGATCACGCA CCAAGTCCAG TCACTGACGT TTACTTGTAA TAACCATGAT
CTACAGCTAA TCCGTGACCC ACAGTTTTAC AACCGATTTG TTCGTTTGAT CGGCATTGAA
AATGCACAAG GTGATGGCTG TTCCACCATA GGTTATCCCA TTGCTCTTGC AGAAGATTCA
TCCGCCGCTG AACCGACGGG CTTCACTCTC TCTGCAACAC CTAAAACCCA AACGGCTTCA
CGAGAATTGT TGATCCAATA TAGCGAACCA AGAGGCCGTG TCTTTTGGGT GGTGGATGGA
AGTTGGGCGC AAGACTTATT GCGTGAACCT TGTGGTGACT GTTTTTACTT ACACTTTAAG
TTTTTGGATC CTATGCTCAA TGAGTTGGCC ATTCAGCGTG GCAACATCGC CATACTAGGG
GAATCCAATC CGCTTTCTAT TCGCCAGCAT TCGGGTAACG CTCCTTTCCA TAGTGAACAA
ACCCTGCTTG CTGGTGAGAC TTTACTCACT TTGGCACGGC AACAGGTTTT CACTTGGGGG
ATCCCTCTCG CAGTACTGCT TGGCGTGTTT CTCTCAGCAA GCTATTTGAT TTTACGTAAC
TATCGTAATT CTATTGAAGG CTTGATTGAA AAAGGCATCA GAGATGAAGA GTTTATTCCC
TATTATCAGC CCATTGTCGA TTCAAGAACG CAAGAGGTCG TAGGTTACGA AGTGCTACTA
CGCTGGCAAA AAGGCCACCA ACTTGTACCC CCCAGCCTAT TCATTTCTGC AGCAGAAGAT
TCTGGCTTGG TCGTCAAGAT CACCAACCAA CTTATTCAAC AAGTCCATCG CGATCTCGCG
CAGATCCCCG CACCACGCTG GGTCAGCATT AATGTAGTCG CCGACCACCT TGAGCAACAC
CATCTGACCC ATTTATTGGA AGAGCTACAT TGGCCATACA GTGAGCGCCT TAAATTTGAA
CTTACCGAAC GAGTTCCGAT CAAGGCCATG ACTCAAGCGC AAGAGGAAGT GTTTTACCTC
TTGAAAAAAG GGTATCAGTT TAAAATTGAT GATTTTGGTA CTGGCTACGG TGGCTTTGCT
TATCTACAAA ACTTACAAAT CAGTAGCATC AAAATCGACA AAATGTTCGT CGATACCATC
AACACCCACG ATGTAAAAAT CAGTGTATTA GATTCGATCA TCGCTTCCGC TCAAGGAGGA
AACATTGAAG TCATCGCGGA AGGGGTTGAG CACCAATACC AAGTTGATTA CTTAGCAGAA
CGAAATGTGT TTTGGATTCA AGGCTATTTT TACGCCAAAC CGATGCCATT AGAGCAAGTT
TTGGCATTTG AAAAACAACC CTCGATACCA TTAAACTTTG CCACAAGCAA AATATAA
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| Protein sequence | MAKEKTVISK APMRIAFAIL LSPLIIFLLA QPLWAPLVAQ HLLNQKFAEI NQYLEQRNLA
LDSMITHQVQ SLTFTCNNHD LQLIRDPQFY NRFVRLIGIE NAQGDGCSTI GYPIALAEDS
SAAEPTGFTL SATPKTQTAS RELLIQYSEP RGRVFWVVDG SWAQDLLREP CGDCFYLHFK
FLDPMLNELA IQRGNIAILG ESNPLSIRQH SGNAPFHSEQ TLLAGETLLT LARQQVFTWG
IPLAVLLGVF LSASYLILRN YRNSIEGLIE KGIRDEEFIP YYQPIVDSRT QEVVGYEVLL
RWQKGHQLVP PSLFISAAED SGLVVKITNQ LIQQVHRDLA QIPAPRWVSI NVVADHLEQH
HLTHLLEELH WPYSERLKFE LTERVPIKAM TQAQEEVFYL LKKGYQFKID DFGTGYGGFA
YLQNLQISSI KIDKMFVDTI NTHDVKISVL DSIIASAQGG NIEVIAEGVE HQYQVDYLAE
RNVFWIQGYF YAKPMPLEQV LAFEKQPSIP LNFATSKI
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