Gene VC0395_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0032 
Symbol 
ID5134054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp35666 
End bp35842 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content48% 
IMG OID640530355 
Producthypothetical protein 
Protein accessionYP_001214873 
Protein GI147672397 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.865838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAG AAGGAAGTGT AGCTCCCAAA GAGCGGATTA ATATCAAGTA TATTCCGGCG 
ACGGGGGATG CACAGGCTGA GGTTGAGCTA CCACTCAAAA CCCTAGTTGT AGGTGATTTC
AAAGGGCATG CGGAGCAAAC CCCATTGGAA GAGCGTGCAA CAGTCACGGT AGATTAA
 
Protein sequence
MSKEGSVAPK ERINIKYIPA TGDAQAEVEL PLKTLVVGDF KGHAEQTPLE ERATVTVD