Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0032 |
Symbol | |
ID | 5134054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 35666 |
End bp | 35842 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530355 |
Product | hypothetical protein |
Protein accession | YP_001214873 |
Protein GI | 147672397 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.865838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAG AAGGAAGTGT AGCTCCCAAA GAGCGGATTA ATATCAAGTA TATTCCGGCG ACGGGGGATG CACAGGCTGA GGTTGAGCTA CCACTCAAAA CCCTAGTTGT AGGTGATTTC AAAGGGCATG CGGAGCAAAC CCCATTGGAA GAGCGTGCAA CAGTCACGGT AGATTAA
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Protein sequence | MSKEGSVAPK ERINIKYIPA TGDAQAEVEL PLKTLVVGDF KGHAEQTPLE ERATVTVD
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