| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0030 |
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| Symbol | |
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| ID | 5133991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 33816 |
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| End bp | 35294 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530353 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214871 |
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| Protein GI | 147672284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.599961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCTA CGACTGAAAA GGTATTGGAA AGGCCACAGC TTGCTCAAGG CAGCCTTCTT
GATGAAATTA TGGCGCAAAC CCGTATCGCA CCAAGCGAAG AGGGTTACGA CATCGCGAAA
AAAGGTGTTG CAGCGTTTAT CGAAAATCTT ATGGGTTCAC AACACTCTGC TGAGCCTGTC
AACAAATCTC TGGTTGACCA AATGTTGGTT GAACTGGATA AGAAAATCAG TGCACAGATG
GATGAAATCC TGCACAACTC GCAATTTCAA GCGATGGAAT CGGCGTGGCG CGGTTTGAAG
CTGTTCGTGG ATCGCACTGA TTTTCGTGAA AATAACAAAG TCGAAATCCT TCACGTAACC
AAAGATGAAC TGCTGGAAGA TTTCGAGTTT GCTCCAGAAA CGGCTCAGTC CGGTCTTTAC
AAGCACGTTT ATTCTGCCGG TTATGGTCAA TTTGGTGGCG AACCTGTTGG CGCGATCATT
GGTAACTATG CGTTTACCCC TTCAACGCCA GATATGAAGC TGCTGCAATA CATGGGCGCA
CTGGGTGCCA TGGCGCATGC TCCTTTCATT TCAAGCGTAG GTCCTGAATT CTTTGGTATC
GATTCTTTTG AAGAACTGCC TAACATTAAA GATCTCAAGT CGACATTTGA AAGCCCGAAA
TACACCAAAT GGCGTTCATT GCGTGAATCG GAAGATGCGC GCTATCTTGG TTTGACTGCG
CCTCGTTTCC TGCTGCGTGT TCCTTACGAT CCAATCGAAA ATCCAGTGAA GTCGTTCAAT
TATGCGGAAA ACGTCAGTGC TTCGCACGAG CACTACCTGT GGGGTAACAC GGCATTTGCC
TTCGCAACTC GTTTGACGGA TAGCTTTGCT AAATATCGCT GGTGTCCAAA CATTATCGGT
CCACAAAGTG GTGGTGCAGT TGAAGATCTG CCGGTGCATG TCTTTGAATC TATGGGTGCA
TTGCAAAGCA AGATCCCAAC CGAAGTCCTG ATCACGGACC GTAAAGAGTT TGAACTGGCG
GAAGAAGGTT TTATTGCTCT TACTATGCGT AAAGGCAGTG ATAACGCGGC GTTCTTCTCT
GCAAACTCCA TTCAAAAACC TAAGGTTTTC CCAAATACCA AAGAAGGCAA AGAAGCGGAA
ACCAACTACA AGTTGGGTAC CCAGTTGCCG TACATGATGA TCATCAACCG TTTGGCGCAC
TATGTGAAAG TTCTGCAACG TGAGCAGATC GGTGCTTGGA AAGAGCGTCA AGATCTTGAG
CGTGAACTGA ACTCATGGAT CAAACAATAC GTTGCTGATC AAGAGAACCC ACCTGCAGAC
GTACGTAGCC GTCGTCCACT TCGTGCTGCG CGCATTGAAG TGATGGATGT GGAAGGCAAT
CCAGGTTGGT ATCAGGTGTC GCTCTCGGTT CGTCCTCACT TTAAGTACAT GGGTGCGAAC
TTTGAGTTGT CATTAGTTGG ACGTCTTGAT CAAGCCTGA
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| Protein sequence | MMSTTEKVLE RPQLAQGSLL DEIMAQTRIA PSEEGYDIAK KGVAAFIENL MGSQHSAEPV
NKSLVDQMLV ELDKKISAQM DEILHNSQFQ AMESAWRGLK LFVDRTDFRE NNKVEILHVT
KDELLEDFEF APETAQSGLY KHVYSAGYGQ FGGEPVGAII GNYAFTPSTP DMKLLQYMGA
LGAMAHAPFI SSVGPEFFGI DSFEELPNIK DLKSTFESPK YTKWRSLRES EDARYLGLTA
PRFLLRVPYD PIENPVKSFN YAENVSASHE HYLWGNTAFA FATRLTDSFA KYRWCPNIIG
PQSGGAVEDL PVHVFESMGA LQSKIPTEVL ITDRKEFELA EEGFIALTMR KGSDNAAFFS
ANSIQKPKVF PNTKEGKEAE TNYKLGTQLP YMMIINRLAH YVKVLQREQI GAWKERQDLE
RELNSWIKQY VADQENPPAD VRSRRPLRAA RIEVMDVEGN PGWYQVSLSV RPHFKYMGAN
FELSLVGRLD QA
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