| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0029 |
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| Symbol | |
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| ID | 5134385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 33388 |
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| End bp | 33813 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530352 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214870 |
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| Protein GI | 147671801 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.475972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTACA TCGCACCTGA AGAGAGTGCA TTTGGTGTTG GCTTTTTCGA ACGTTTGGAA
GCCAACGCCA AACCTATGTC GCTGACCCGT GGGCCAGACG CGTGGGATGT ACTCGAATCG
ATCAAACGGA ATGTCTCTAA CATTCTGAAC ACTCGAATTG GTGGAGCGCA AAGTGCCCCT
CATCTCGGGT TGGTGGATTT TAATGATGCA ACGCTGGAAA CCTTAGATCT CTCCGTGCGA
ATTAAATTGG CGATTCAACA GTGCCTTGAG CGCTATGAGC CGCGTTTAAC TCGAGCGGAT
CAAGATAGCT TTAACTCGCT GACTTTAAGG TTCCACATTA CCGCGACCAT CAATAGCGAA
GCGTTACACG AAAAAGTCCA GTTCAGTCTG TTATTGGATC AAAGCAGAAA ATATCGAGTG
TTTTAA
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| Protein sequence | MTYIAPEESA FGVGFFERLE ANAKPMSLTR GPDAWDVLES IKRNVSNILN TRIGGAQSAP
HLGLVDFNDA TLETLDLSVR IKLAIQQCLE RYEPRLTRAD QDSFNSLTLR FHITATINSE
ALHEKVQFSL LLDQSRKYRV F
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