| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0027 |
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| Symbol | |
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| ID | 5134134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 30633 |
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| End bp | 31586 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530350 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214868 |
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| Protein GI | 147671686 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.273219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTTGC CGGGCAATGT ACGGGAATAC AACTTCTACC AACTGGTTGA GCTGTTGCAA
AAACTGGCTG ATATCAATCC TGAATCGGAA GAGTGGGAGC GCGATTGCCG CTTGGTGTTC
AGTGCTAACC CGAGCCTTGG ATTTTCGCCT AGTGATGTGA TGGCGCTTGA AGCGCGTGAC
GATGATCGCT GGGTTATGTT GACCAACTTT TTTGGCCTTT CCGGTGCACA GTCACCTCTG
CCGGGGTTCA TCCTTGAGCA ATTGGTGACG GAAGAGCCTG GGGGGTATAA GCAGCCGTTT
CTCGATTTTT TCAATAACCG ATTGATTAAT TTGGTTTATC GCGTTTGGCG TAAATACCGT
TACTACGTAC GTTTTCAGCC CGGTGCGCAG GATGTGTTCT CTGCACAGCT GTTTGCGCTG
GTGGGGTTGG GCGATCCTGA CCTTCGCGGT GAAACGCCGA TCAACTGGTG CAAAATGCTG
GCTTACGCGG GCACGCTGGC CGGACGTAGC CGTTCGCCAC AAGTCGTGGC CGGCATTATT
GCTCACTGTT TTGATTTACC GGATGTCTCC ATTCGCCAGT GGGTCAGACG TCGGGTATCG
ATTGACCGGA GTCAGCAACT GGCGCTGGGC AAGCAGAATG CGCGGTTGGG GATGGACACG
GTGATTGGCG AGTCCGTTAT TGATTGTAGT GGAAAATTTA TTATCTGTAT CAAACGGTTA
TCTCGCAGTC GTTTTGCTGA TTTTTTGCCC TCCGGTAAAG AGTATCAGCC ACTTTGCAAG
CTGGTGGAGT TTATTTTGCG CGAACAGATG GCGTACGACC TCGAGCTGGC GATGGATGAA
CGGGAAGCGC CGCTGTTTTG TCTGGATGCG AAACAGAATA TCGCCCTCGG CTGGACTTCG
TTTCTTGGCC AAGATGCAGC CAATAAACAT GTGTTAATTC AAGTAAGGCA ATAA
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| Protein sequence | MSLPGNVREY NFYQLVELLQ KLADINPESE EWERDCRLVF SANPSLGFSP SDVMALEARD
DDRWVMLTNF FGLSGAQSPL PGFILEQLVT EEPGGYKQPF LDFFNNRLIN LVYRVWRKYR
YYVRFQPGAQ DVFSAQLFAL VGLGDPDLRG ETPINWCKML AYAGTLAGRS RSPQVVAGII
AHCFDLPDVS IRQWVRRRVS IDRSQQLALG KQNARLGMDT VIGESVIDCS GKFIICIKRL
SRSRFADFLP SGKEYQPLCK LVEFILREQM AYDLELAMDE REAPLFCLDA KQNIALGWTS
FLGQDAANKH VLIQVRQ
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