| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0023 |
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| Symbol | |
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| ID | 5134780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 27321 |
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| End bp | 27800 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530346 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214864 |
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| Protein GI | 147672311 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCAAGCT ATAACCATGA TTCACCCAGC CACTCTTTCC AGCCGCTGAT CCGCAGCTTG
CGTCAGAGCT TGAGCGTGGT GCTAGAGCCG CGTGCCGTCT CTATCCAACT GGATAAACGT
AAGTACGGTT TGATGGTTGC GCCAATCCAT GATCCGCAAC TGATGGAGAG TGCAGAGTTT
ATCATCGCGG TTAAAGCTCG CATGCCGTTG GATGAGCTAC GCCGTCTGTT TACTCAGCAA
ACCAAAGTGG CATCGGTTGA GAAAATTCGT GAACTCATCT CACTGCAACT GCCGGGTATT
CCATTGACGC CATTACCCGT CGCACCGCGC CAATTGCCTT ACCACGCTGG CTACACCTAC
TACCAACTGG ATAAAACCAG CGCTGCATGG GCGATGTTGA CTCATTCCAG CGGTTTTGCG
TTCCACGTTG CTGCAGCTTT TGACGATCTT GAGCTGCAAT TCTGGGCTAT CAGGAGCTAA
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| Protein sequence | MPSYNHDSPS HSFQPLIRSL RQSLSVVLEP RAVSIQLDKR KYGLMVAPIH DPQLMESAEF
IIAVKARMPL DELRRLFTQQ TKVASVEKIR ELISLQLPGI PLTPLPVAPR QLPYHAGYTY
YQLDKTSAAW AMLTHSSGFA FHVAAAFDDL ELQFWAIRS
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