| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0010 |
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| Symbol | rbsA |
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| ID | 5134843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 9066 |
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| End bp | 10568 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530333 |
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| Product | D-ribose transporter ATP binding protein |
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| Protein accession | YP_001214851 |
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| Protein GI | 147671783 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG CAATTTTAGC CCTGAGCCAA ATTGAAAAAG CGTTCCCTGG CGTGAAAGCC
TTGGACAAAG CGAGCCTGAA TGTCTATCCG GGGCGGGTAA TGGCGTTAAT GGGTGAAAAC
GGTGCTGGCA AATCAACCTT GATGAAAGTT CTGACCGGCA TTTATAGCAA AGATGCGGGC
AGCATTGAGT ATCAAGGCCA ACCTGTCAGT TTTAAAGGCC CACGAGATTC GCAGCTGGCG
GGCATCAGCA TTATTCACCA AGAGCTCAAC CTGATCCCGC AGCTGACGAT TGCGGAAAAT
ATTTTCCTTG GCCGTGAGAT GACTTCGCCA TTCGGACGCA TTCTGTGGGA TGAAATGCAT
CGTAAAGCGG ATCAACTGCT CGCACGTTTG AATGTGAAAC ACAGTGCTAA AACCTTGCTC
GGAGAGCTGA GCTTGGGTGA GCAGCAGATG GTGGAAATTG CCAAAGCGCT GTCGTTTGAA
TCGAAAGTTA TCATCATGGA TGAACCGACC GATGCGCTGA CCGATACCGA AACCGAATCT
CTGTTTAATG TCATTAATGA ACTGCGCGAA CAAGGCTGCG GCATTGTGTA TATCTCACAC
CGTTTGAAAG AAATTTTTGA GATTTGTGAC GACATCACAG TGCTGCGTGA CGGCAAATTT
ATTGGCGAGT GCCGCGTGTG CGATACCAAT GAAGATGGCC TGATTGAGAT GATGGTTGGC
CGTAAACTGG AAGAGCAGTA CCCACGTATT GCCGCGCAGC AGGGTGACAT CAGCCTTGAG
GTGATTGGCC TAACTGGCTC GGGTGTGCAC GATGTCAGCT TTACGCTTAA AAAAGGCGAG
ATTCTTGGTG TCTCTGGCCT GATGGGGGCT GGGCGCACTG AACTGATGAA GGTGATTTAT
GGCGCGCTCC CTTCGGAGCG TGGCGTGATT AACCTCAACG GGCGCACGGT TAACCCTGTC
AGTCCGCAAG ATGGTTTGGC CAATGGCATC GCCTATATTT CTGAAGATCG TAAAGGCGAT
GGCTTGGTAC TCGGTCTTTC GGTGAAAGAG AACATGTCAC TTTGCGCGCT CGATCAACTG
AGCAAAGGTG TGCAAATTCG TCATGCCGAT GAAGTGATTG CTGTGGATGA CTTTATTCGT
CTGTTCAACA TCAAAACCCC AAGTCGTGAG CAAATCATTG GCAACCTTTC TGGGGGCAAT
CAGCAGAAAG TGGCGATCGC TAAAGGACTG ATGACCAAAC CCAAAGTACT GATTTTGGAC
GAACCGACTC GCGGTGTTGA CGTTGGCGCC AAAAAAGAGA TTTACCAACT GATCAACCAA
TTCAAAGCTG AAGGCATGAG CATCATTTTA GTCTCCTCAG AAATGCCCGA AGTGCTGGGC
ATGAGTGACC GCATTCTGGT GATGCATGAA GGGCGGATTA GCGGCGAGTT TATGGCGAGC
GAAGCCGATC AAGAGAAATT AATGGCGTGT GCGGTAGGGC GTAACCCTGC TCACGCAGCA
TGA
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| Protein sequence | MTQAILALSQ IEKAFPGVKA LDKASLNVYP GRVMALMGEN GAGKSTLMKV LTGIYSKDAG
SIEYQGQPVS FKGPRDSQLA GISIIHQELN LIPQLTIAEN IFLGREMTSP FGRILWDEMH
RKADQLLARL NVKHSAKTLL GELSLGEQQM VEIAKALSFE SKVIIMDEPT DALTDTETES
LFNVINELRE QGCGIVYISH RLKEIFEICD DITVLRDGKF IGECRVCDTN EDGLIEMMVG
RKLEEQYPRI AAQQGDISLE VIGLTGSGVH DVSFTLKKGE ILGVSGLMGA GRTELMKVIY
GALPSERGVI NLNGRTVNPV SPQDGLANGI AYISEDRKGD GLVLGLSVKE NMSLCALDQL
SKGVQIRHAD EVIAVDDFIR LFNIKTPSRE QIIGNLSGGN QQKVAIAKGL MTKPKVLILD
EPTRGVDVGA KKEIYQLINQ FKAEGMSIIL VSSEMPEVLG MSDRILVMHE GRISGEFMAS
EADQEKLMAC AVGRNPAHAA
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