| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0007 |
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| Symbol | rbsK |
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| ID | 5134107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 6070 |
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| End bp | 6990 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530330 |
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| Product | ribokinase |
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| Protein accession | YP_001214848 |
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| Protein GI | 147671538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.328015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT TGGTGGTTCT GGGTAGCGTC AATGCAGACC ATGTGCTGCA AGTGCCTTCA
TTTCCTCGCC CCGGAGAAAC CCTACACGGG CGCAATTATC AAGTCATTCC GGGCGGAAAA
GGGGCAAACC AAGCGGTTGC CGCCGCGCGT ATGCAAGCGG ATGTAGGTTT CATTGCCTGT
GTTGGCGATG ATTCGTTTGG CATTAATATT CGTGAAAGTT TTAAGCTAGA TGGCATTAAT
ACGGCGGGCG TGAAGCTGCA ACCGAATTGT CCAACTGGTA TTGCGATGAT TCAAGTTTCA
GACAGTGGTG AGAACAGTAT CTGTATTTCT GCAGAAGCCA ATGCCAAGCT GACGGCCGCT
GCGATTGAGC CCGATCTTGC GGCGATTCGG GATGCACGTT ATTTGCTGAT GCAACTGGAA
ACACCGCTTG ATGGCATTTT AAAAGCAGCG CAAGAAGCCA AAACGGCCAA AACCAATGTG
ATTCTTAACC CTGCACCAGC CCGTGAACTG CCTGATGAGT TGCTGAAGTG TGTAGATCTG
ATTACGCCGA ACGAAACCGA AGCGGAAGTG CTCACCGGAA TTACGGTTTA TGATGATTCT
AGCGCGCAGC AAGCGGCGGA CGCTTTACAC TGTAAAGGCA TCGAGATTGT GATTATTACC
CTTGGTTCAA AGGGTGTGTG GCTGAGCCAA AATGGTCGCG GGCAACGAAT TCCCGGTTTT
GTGGTGAAAG CCACGGACAC CACCGCCGCA GGTGATACCT TTAACGGTGC ATTGGTGACT
GGCTTGTTGC AAGAAATGCC TCTAGAATCA GCCATTAAGT TTGCCCATGC CGCTGCCGCA
ATTTCGGTAA CACGCTTTGG TGCACAAACC TCGATTCCCA CTCGTGCGGA AGTTGAGGCC
TTTTTAGCAG AACACTCATA G
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| Protein sequence | MNKLVVLGSV NADHVLQVPS FPRPGETLHG RNYQVIPGGK GANQAVAAAR MQADVGFIAC
VGDDSFGINI RESFKLDGIN TAGVKLQPNC PTGIAMIQVS DSGENSICIS AEANAKLTAA
AIEPDLAAIR DARYLLMQLE TPLDGILKAA QEAKTAKTNV ILNPAPAREL PDELLKCVDL
ITPNETEAEV LTGITVYDDS SAQQAADALH CKGIEIVIIT LGSKGVWLSQ NGRGQRIPGF
VVKATDTTAA GDTFNGALVT GLLQEMPLES AIKFAHAAAA ISVTRFGAQT SIPTRAEVEA
FLAEHS
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