| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0001 |
|---|
| Symbol | glpT |
|---|
| ID | 5135044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 15 |
|---|
| End bp | 1373 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640530324 |
|---|
| Product | sn-glycerol-3-phosphate transporter |
|---|
| Protein accession | YP_001214842 |
|---|
| Protein GI | 147671835 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter
[TIGR00881] phosphoglycerate transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000000530916 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC TCTTCAAACC GGCTGCGCAT ACGCAGCGGC TGCCATCCGA TAAGGTGGAC
AGCGTCTATT CACGCCTTCG TTGGCAACTT TTCATCGGTA TTTTTGTTGG CTATGCAGGC
TACTATTTGG TTCGTAAGAA CTTTAGCTTG GCAATGCCTT ACCTGATTGA ACAAGGCTTT
AGTCGTGGCG ATCTGGGTGT GGCTCTCGGT GCGGTTTCAA TCGCGTATGG TCTGTCTAAA
TTTTTGATGG GGAACGTCTC TGACCGTTCT AACCCGCGCT ACTTTCTGAG TGCAGGTCTA
CTCCTTTCGG CACTAGTGAT GTTCTGCTTC GGCTTTATGC CATGGGCAAC GGGCAGCATT
ACTGCGATGT TTATTCTGCT GTTCTTAAAC GGCTGGTTCC AAGGCATGGG TTGGCCTGCT
TGTGGCCGTA CTATGGTGCA CTGGTGGTCA CGCAAAGAGC GTGGTGAGAT TGTTTCGGTC
TGGAACGTCG CTCACAACGT CGGTGGTGGT TTGATTGGCC CCATTTTCCT GCTCGGCCTA
TGGATGTTTA ACGATGATTG GCGCACGGCC TTCTATGTCC CCGCTTTCTT TGCGGTGCTG
GTTGCCGTAT TTACTTGGCT AGTCATGCGC GATACTCCTC AATCTTGTGG TTTACCACCG
ATTGAAGAGT ACAAAAACGA CTATCCCGAT GATTACGATA AGTCGCATGA AAATGAGATG
ACTGCGAAAG AGATCTTCTT TAAGTATGTC TTCAACAACA AACTGCTTTG GTCGATTGCG
ATTGCTAACG CCTTCGTTTA CCTGATCCGC TACGGTGTAC TTGACTGGGC TCCGGTTTAC
CTCAAAGAAG CCAAACACTT CACGGTTGAT AAATCTTCTT GGGCTTACTT CCTGTACGAG
TGGGCGGGCA TTCCGGGTAC TTTGTTGTGT GGTTGGATTT CCGACAAAGT GTTTAAAGGC
CGCCGCGCTC CAGCAGGCAT CCTGTTCATG GTTTTAGTAA CTCTGGCAGT TCTGGTTTAC
TGGTTCAACC CAGCTGGTAA CCCAGCGGTA GATATGGCTG CTCTGGTCGC GATCGGCTTT
TTGATCTACG GCCCTGTGAT GCTGATTGGC CTTTACGCTC TGGAACTGGC TCCGAAGAAA
GCCGCCGGTA CCGCAGCAGG TCTGACTGGT CTCTTTGGCT ACTTAGGTGG TGCTGTGGCA
GCTAACGCGA TATTGGGCTA TACCGTTGAC CACTTCGGTT GGGATGGCGG CTTCATGGTC
TTGGTTGCCT CTTGTGTACT CTCAGTGCTC TGCTTGATTT ACGCTTTCGT TGGCGAACGC
GCTCACCATA ACGATAAGCT TAAACAAGCG ACCATTTAA
|
|---|
| Protein sequence | MFELFKPAAH TQRLPSDKVD SVYSRLRWQL FIGIFVGYAG YYLVRKNFSL AMPYLIEQGF
SRGDLGVALG AVSIAYGLSK FLMGNVSDRS NPRYFLSAGL LLSALVMFCF GFMPWATGSI
TAMFILLFLN GWFQGMGWPA CGRTMVHWWS RKERGEIVSV WNVAHNVGGG LIGPIFLLGL
WMFNDDWRTA FYVPAFFAVL VAVFTWLVMR DTPQSCGLPP IEEYKNDYPD DYDKSHENEM
TAKEIFFKYV FNNKLLWSIA IANAFVYLIR YGVLDWAPVY LKEAKHFTVD KSSWAYFLYE
WAGIPGTLLC GWISDKVFKG RRAPAGILFM VLVTLAVLVY WFNPAGNPAV DMAALVAIGF
LIYGPVMLIG LYALELAPKK AAGTAAGLTG LFGYLGGAVA ANAILGYTVD HFGWDGGFMV
LVASCVLSVL CLIYAFVGER AHHNDKLKQA TI
|
|---|
| |