Gene DehaBAV1_R0001 details

Gene Information

• Locus tag: DehaBAV1_R0001
• ID: 5131798
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 47151
• End bp: 50104
• Gene Length: 2954 bp
• GC content: 52%
• IMG OID: 640528952
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00828504
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCAAGCAGG TAAGGGCACA TGGTGGATGC CTTGGTATCA AGAGCCGATG AAGGACGTGG 
TAAGACTGCG ATAAGCCTCG GTCAGCTGCC TAACAAGCTA AGCCGGGGAT TTCCGAATGG 
GGCAACCCGC TCAGGCAAAA CCTGAGTACT CCCAGCTCAA CACATAGGCT GGGTAGAGGT 
AAGTGGGGGA AGTGAAACAT CTCAGTACCC CGAGGAAAAG AAATTATTCT CCTAGTAGCG 
GCGAGCGAAC GGGGATGAGC CTAAACCTTG TAATCTTAGT GGTTCTGTAG CCTATGTTTA 
CAAGGGGTTG TAAGAAGAAT TTGGTTTGTG CAGAGCAAAC CGAGAAGTTA CAAACCTAAC 
CCTATTAGAA GGTCCCTGGA ACGGGCAACC ACAGAGGGTG AGAGTCCCGT AAATTAAAGG 
GTATAGGCTT CTGATTCTTT CTTAAGTACC ACGAGACTCG TGGAATCTCG TGGGAATCCG 
CCGTGACCAC ATGGCAAGGC TAAATACTCT TGATGACCGA TAGTGAACTA GTACCGTGAG 
GGAAAGGTGA AAAGCACCCC GAGAGGGGAG TGAAATAGAA CTGAAACCGT GTGCCTACAA 
GCAGTCAGAG GAGCGTAAGC TCTGATGGCG TGACTATTGA AGAATTATCC GACGAGTTAC 
TAAGTGCAGC TGGTTAAGCA ATTAAGTTGC GCAGCCGAAG CGAAAGCGAG TCTGAATAGG 
GCGTTTTAGT TGCACTGAGT AGACCCGAAG CCGGGTGATC TATCCATGGC CAGGGTGAAG 
TGAAGGTAAT ACTTCGCGGA GGCCCGAACC AGTCAACGTG GCAAAGTTGT TGGATGAGCT 
GTGGATAGCG GTTATATGCC AAACGAACCC GGGGATAGCT GGTTCTCCTC GAAATGCATT 
TAGGTGCAGC CTCAGGTGTT CATTAATGGA GGTAGTGCAC TGGATAGACT AGGTGGGAGA 
GATCCTGTCA ACTCTAACCA AACATCGAAT GCCATTAATC AAAGCCTGGG AGTGAGACTA 
TGGGGGCTAA GCTCCGTAGT CAAAAGGGAA ACAGCCCAGA CCATCAGCTA AGGTCCCTAA 
GCGCAGGCTA AGTGGGAAAG GAAGTAGCAT TGCCTAGACA TCCAGTAGGT TGGCTTAGAA 
GCAGCCATCC TTTAAAGAGT GCGTAATAGC TCACTGGTTG AGTGGTGTTG CGCCGACAAT 
CCAACGGGGC TTAAGCCTGT CACCGAAGCT ATGGATCTAC CTATATGGTA GATGGTAGAG 
GAGCGTTCCC TCGGCAGTGA AGCAGGAGTG TAAACAACTG TGGAGCTTAG GGAAGTGAGA 
ATGTCGGAAT GAGTAGCGCA AGGCGTGTGA GAAACACGCC CACCGTAAAC CTAAGGTTTC 
CTACGCAAGG TTAATCCGCG TAGGGTTAGT CGGACCTAAG CCGAGGCCGA AAGGCGTAGA 
GCGATGGACA GCAGGTTATT ATTCCTGCAC CACCGTTGTG GAGGTAAAGG GGGGACACAG 
GAGGATAGAT CAGGCATGCC CATTGGACAT GGCGTGTCGC TAAACCCTAG ACGTTTCAGG 
ATAGGCAAAT CCGTCCTGGA GTTAAGTTGA AGTTTGGTGG AAGGTGCGGA GAGATCCAAG 
CCAATCTGGT TGAGTCCAAG CTGTCGAGAA AAGCCTCGTT ACTGTTGAAG CAATGGTGCC 
CGTACCGCAA ACCGACACTG GTAGGTGGGG GTAAATGTCC CAAGGTGATC GAGATAACCC 
TCGTTAAGGA ACTCGGCAAT CTAGCCCCGT AACTTCGGGA GAAGGGGTGC CCTCGCGAGA 
GGGTTACAAT AAAGTGGCTC GAGTGACTGT TTAACAAAGA CACAGGTCTC TGCAAAAGCG 
AAAGCTGAAG TATAGGGGCT GACACCTGCC CAGTGCTGGA AGGTTAAGGG GAGGAGTTAG 
GGTAACCGAA GCTCTGAACC GAAGCCCCAG TGAACGGCGG CCGTAACTAT AACGGTCCTA 
AGGTAGCGAA ATCCCTTGTC GGGTAAGTTC CGACCCGCAC GAAAGGTATA ACAACTTGAG 
CGCTGTCTTA ACGAGGGACT CGGTGAAATT GAATTACCCG TGAAGATGCG GGTTTCCCGC 
GACTGGACAA AAAGACCCCG TGGAGCTTTA CTATAACTTG CCATTGAGTC TGGGTTTATC 
ATGTGTAGGA TAGGTGGGAG GCTGAGAAGC CAGGGCGCTA GCCTTGGTGG AGCCAACGTT 
GAAATACCAC TCTTGATGGA TCTAGCCTCT AACTCTAGAA CAAGCTAGTG GACAGTGGCT 
GGTGGATAGT TTGACTGGGG CGGTCGCCTC CTAAATTGTA ACGGAGGCGC CCAAAGGTTC 
CCTCAGGGTG GATGGAAATC ACCCTAAGAG TGCATTGGCA TAAGGGAGCT TGACTGCGAG 
ACATACAAGT CGAGCAGGGA CGAAAGTCGG GCAAAGTGAT CCTACGGCAC CGAGTGGAAG 
GGCCGTGGCT TATCGGATAA AAGCTACCCC GGGGATAACA GGCTTATCTT GCCCAAGAGT 
TCACATCGAC GGCAAGGTTT GGCACCTCTA TGTCGGCTCG TCGCATCCTG GGGCTGGAGT 
AGGTCCCAAG GGTCCGGCTG TTCGCCGGTT AAAGCGGCAC GCGAGCTGGG TTCAGACCGT 
CGTGAGACAG GTCGGTCTCT ATCCGTCGTG GGCGTCTGGA GATTTGCGAG GGTCTTTCCA 
TAGTACGAGA GGACCTGGAA GGACAGACCA ATGGTGTGTC AGTTGTTCTG CCAAGGGCAT 
TGCTGAGTAG CCAAGTCTGG TTTGGATAAG CGCTGAAAGC ATCTAAGTGC GAAGCCGGCC 
TCAAGATTAG ATCTCCCATC CCGGGCAACC GGGGGTAAGA CCGCAGGTAG ACTACCTGCT 
TGATAGGCTG CGTGTGTAAG TACCGTAAGG TATTAAGCTT AGCAGTACTA ATGGTCGAGG 
GCTTGACCTG TTTC 

 

Protein sequence