| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1386 |
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| Symbol | |
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| ID | 5132040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1340906 |
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| End bp | 1341853 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640530323 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_001214841 |
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| Protein GI | 147670023 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.442669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA TGAATGAACT CAAGATAGTC TTTATGGGCA GTCCCGAATT TGCCCTTACC
CCGCTTAAAA TGCTTCTTGC CGAAGGATAC GATATCTGCG GCGTTTACAC CCAGCCTGAC
CGTCCGGCCG GGCGGGGGCG TGAGCTTTGT CCTCCCCCGG TAAAGACACT AGCACTGGAG
CATGGGCTGG CGGTTTACCA GCCCCAGAGT CTCAAGAAAC CTGAAGAGCA GGCTTTTTTA
AAGGAGCTTA AACCGGATGT GATAGTAGTG GCTGCTTACG GTCTTATTTT GCCTCAGGCA
GTCCTGGATA TACCTGTTTA CGGGGTGCTC AATATTCACC CCTCCCTGCT TCCCCGTTAC
CGGGGAGCAA CTCCGGTTGC CGCCACTCTG CTGGGGGGTG ACGAATGGGC TGGCGTTTCT
CTGATGAAAC TGGAAGCTGG ACTGGACACC GGACCGGTTT ATTCCCGTTC TATGGTAGCC
ATCCGCCCTG AAGATACCAC CCCCATTCTG GCAGACAAAC TGGCCTTTAT CGGCGGGTGT
ATGCTTTTGG AGTTATTAAG TCAAATCCCC TCTCTGCCGG AACCGCAGGT GCAGGATAAC
ACTCAGGCCA GCTATTTTGG CATGGTCACC AAAGAGATGG GACTGATAAA CTGGCAGACT
TCGGCTGTTG AAATTGAACG CCGGGTAAGA GCTTTTTTCC CTTGGCCGGG GGTTTTTACC
ACCTTCAATC AAAAAACTCT GAAAATACTG GAAGCAAAGC CCCGAAATCT GGGGCTTGGG
TTGAAGCCTT CTGAAGTCAG GGTTTATGAG CAATCCCGAG TAATGGTTGG CTCAGCTTCG
GGAGAGCTGG AGATAATCCG TCTTCAGCTG GAAGGTAAGG CCGGTTGCAG TGCGGCAGAT
TTTGTCCGCG GGCAACGCAA CTTTGACGGG GTTAATCTGG GAGTTTAG
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| Protein sequence | MAVMNELKIV FMGSPEFALT PLKMLLAEGY DICGVYTQPD RPAGRGRELC PPPVKTLALE
HGLAVYQPQS LKKPEEQAFL KELKPDVIVV AAYGLILPQA VLDIPVYGVL NIHPSLLPRY
RGATPVAATL LGGDEWAGVS LMKLEAGLDT GPVYSRSMVA IRPEDTTPIL ADKLAFIGGC
MLLELLSQIP SLPEPQVQDN TQASYFGMVT KEMGLINWQT SAVEIERRVR AFFPWPGVFT
TFNQKTLKIL EAKPRNLGLG LKPSEVRVYE QSRVMVGSAS GELEIIRLQL EGKAGCSAAD
FVRGQRNFDG VNLGV
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