| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1384 |
|---|
| Symbol | |
|---|
| ID | 5132049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1339672 |
|---|
| End bp | 1340316 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640530321 |
|---|
| Product | SOS-response transcriptional repressor, LexA |
|---|
| Protein accession | YP_001214839 |
|---|
| Protein GI | 147670021 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0425171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTGCTA AACTAACTAC CAGACAGCGG GCTATGATAG ATTTTATTGC CCGTTTCCGC
CGCCGTTACG GGTATCCCCC CAGCATTCGG GATATCGTAA GCGGCTGTAA TATCAGCTCT
ACCTCTGTTG TAGATTACAA CCTCAAAATC CTGCAAAAAA TAGGGCTTAT CCGCCGCCAG
GCCGAAATAT CCCGCGGGAT AGAGCTGGTG GGCACGGAAG AAACCAACGA AGGCCGCATA
AGCATACCTG TCATCGGTCA GATTGCCGCC GGCACTCCCA TACCCGTCCC CGAATCAGAC
AGCTTTGCCG TGGTAACTTC TGACGAAAGT ATAGAGGTTA CCGAAGACCT TACCCGAGGG
CGGGAAAATA TTTATGCTTT GCGGGTTAAG GGCGTCTCCA TGATAGAAGA CCTGATCAAT
GACGGCGATC TGGTAATAAT GCAGCATACC CAAACGGTGG ACAACGGTGA AACGGCCGCT
GTCTGGCTGA AAGACCAGAA AGAAGTCACC CTGAAAAGGA TCTACATGGA ACCGGGCAGG
GTACGCCTGC AGCCGGCCAA CCGCACTATG CCGCCCATTT ATACCAAACC GGATAATGTT
GAAATACAGG GGCGGGTTAT AGCTGTAATC CGCCAGCTGG ATTAG
|
|---|
| Protein sequence | MIAKLTTRQR AMIDFIARFR RRYGYPPSIR DIVSGCNISS TSVVDYNLKI LQKIGLIRRQ
AEISRGIELV GTEETNEGRI SIPVIGQIAA GTPIPVPESD SFAVVTSDES IEVTEDLTRG
RENIYALRVK GVSMIEDLIN DGDLVIMQHT QTVDNGETAA VWLKDQKEVT LKRIYMEPGR
VRLQPANRTM PPIYTKPDNV EIQGRVIAVI RQLD
|
|---|
| |