Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1375 |
Symbol | |
ID | 5132060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1330933 |
End bp | 1333362 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530311 |
Product | DNA gyrase subunit A |
Protein accession | YP_001214830 |
Protein GI | 147670012 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.261522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGACAG GTAATACCAG GCCGATAAAT ATAGAAGATG AAATGAAGGG CTCATACCTT GATTACGCTA TGAGTGTAAT AGTCTCGCGT GCCCTGCCGG ATGTGCGTGA CGGGCTTAAG CCGGTACAGC GGCGCATCCT CTATGCCATG AATGACCTGG GTATGAAACA CAATACCCCC TATAAAAAGA GTGCCCGTAT CGTGGGTGAA GTTTTAGGTA AATACCATCC CCACGGTGAC TCTTCCGTTT ATGACGCCAT GGTACGCATG GCCCAGCCCT TTTCTTATCG TTACCCGCTG GTGGACGGTC AGGGTAACTT TGGCAGTGTG GACAACGACC CCGCGGCTGC CATGCGTTAT ACCGAAGCCC GTTTGGCTCA GATAGCCGAA CATCTGCTGG CAGATATAGA CAAAAATACC GTAGACTTCA TGCCCAACTT TGATTCCTCG CTGGAAGAGC CTACTGTTCT GCCGGCCCGC ATACCTAACT TGCTCATGAA CGGCAGTTCG GGTATTGCGG TGGGTATGGC TACCAATATA CCTCCCCACA ATCTGGCCGA ACTCTGTCAG GCTATTTGTT ACCTGATAGA TAACCCTGAT TGCGGGGTGG ACGAACTGAT GCAGTTTGTT TCCGGTCCGG ACTTTCCTAC CGGCGGTACT ATACTGGGTA CTGATGGCAT AAAGAGTGCC TATGCTACCG GTAAAGGCAA GATTGTTATC CAGGCCAAAG CCCATATTGG CGAAGTGGAA ACCCGCAAGG CTATATTTGT TACCGAGATT CCTTATCAGG TAAACAAGGC CGAACTGGTG GCTAAGATTG CCGAACTGGT CAAGGAACGC AAAGTGACCG GTATTTCCGA CCTGCGTGAC GAATCTGACC GCCAGGGCAT GCGGGTAGTT ATTGAACTAA AGCGGGATGC CGAACCCCAG CAGGTTTTAA ACAGCCTTTA CAAACATACC AATATGCGCA CCTCTTTTTT TGTAAATATG CTGGCGTTGG TAGATGGACA GCCGCAGGTT CTCAGCCTGA AAGAAGTACT TAAAAACTTC ATAGATTTCC GCCATCTTAT TATCACCCGC CGAAGCCAGT TTGAACTTAA AGCCGCCAAA GACCGTGCCC ACATATTGGA AGGTCTTAAA AAAGCGCTGG ATTTTATTGA TCGTATCATT GCCATTATCC GCGGCTCCGA AAACGGTGAT GCCGCCCGTA AAAACCTGAT AGCCGAATTT GATTTCTCGG TAGTACAGGC CCAGGCTATT CTGGATTTGC AGCTTCGCCG TCTGGCCAAT CTGGAACGCC AGAAGATACT GGATGAATAT GCCGAACTTA TGAAACGGAT AGGTTATCTG GAAGACCTGC TGTCTCACCC TGAAAAGATT TATGCTCTGG TGAAGGAAGA TGCCAAAGAC CTTAAATCCA GCTATGGCCA ACCCCGTGCC ACCGAGATTT CTAACCAAGG TGTTATAGAA TTCCGGGTGG AAGACCTGGT GCCTCATATG GATGTTATAG TTACCCTAAG TGAGCGCGGC TTTATCAAAC GGGTACCGGC TAACGTATTC CGTCTGCAGC ATCGCGGCGG TACCGGCATA ATGGGTATGC CCACCCGCGA AGCAGACGCT GTCCGGTTCC TGTCGGTTTC GGATACCCAT GATACCCTGC TCTTCTTTAC CAACCGGGGC AAGGTATTCA GCCTGCGCTG TTTTGATATA CCTGATGATT CCTCCCGTAT CGCCAAGGGT ACAGCTATCG TAAACCTGAT ACCTGTTACC CAGGATGAAC GGATAACCGC CATACTGGAT TTGAAAAGCT TCCCGGCAGA CCATTTCCTG CTGATGGCTA CCAATAAAGG TGAAATCAAG AAAACCTCCC TGCAGGAGTT TACAGCCGTC CGTTCCTCCG GCCTGATAGC CATGGATCTG ACAGCTTCTG ATGAACTGGT AGCGGCGGTA GAGACCATAG AAGAAAAAGA TATTCTGCTG GCTACCCGTC TGGGTCAATC CATCCGCTTC CCGGTGAGTG AACTCCGCAC CAGTCTCAGG GCTTCCGGCG GTGTCAAGGC TATAGTCCTC TCCATGGAGG ACGAAGTGGT CAGCATGGAC GTTGCCCAAG AGGGAACGAT GGTAATAACC GTAACCGAAA ACGGTGCCGG CAAGCTGACT GCCATAGAGG AATACCCCCA GCAGCACCGG GCTGGCAGCG GGGTTATAAA CTTCAAGGTA GTAGATAAAA CCGGTGAAGT GGTTGCCTCC AAGGTAGTCA GTGTAACTGA CCAGATGATG CTTATTTCAG CCGATGGCAT GGTTACCCGT ACCCAGGTCA AGGAAGAAGA CCCCTCACAT GGCATACCCA TCATGGGCAG AGCCACTCAG GGTGTGAGGG TAATGCGTCT TGAAGAAGGT GACAGAGTGG TTGCGGTAGC TACTTTTTAG
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Protein sequence | MVTGNTRPIN IEDEMKGSYL DYAMSVIVSR ALPDVRDGLK PVQRRILYAM NDLGMKHNTP YKKSARIVGE VLGKYHPHGD SSVYDAMVRM AQPFSYRYPL VDGQGNFGSV DNDPAAAMRY TEARLAQIAE HLLADIDKNT VDFMPNFDSS LEEPTVLPAR IPNLLMNGSS GIAVGMATNI PPHNLAELCQ AICYLIDNPD CGVDELMQFV SGPDFPTGGT ILGTDGIKSA YATGKGKIVI QAKAHIGEVE TRKAIFVTEI PYQVNKAELV AKIAELVKER KVTGISDLRD ESDRQGMRVV IELKRDAEPQ QVLNSLYKHT NMRTSFFVNM LALVDGQPQV LSLKEVLKNF IDFRHLIITR RSQFELKAAK DRAHILEGLK KALDFIDRII AIIRGSENGD AARKNLIAEF DFSVVQAQAI LDLQLRRLAN LERQKILDEY AELMKRIGYL EDLLSHPEKI YALVKEDAKD LKSSYGQPRA TEISNQGVIE FRVEDLVPHM DVIVTLSERG FIKRVPANVF RLQHRGGTGI MGMPTREADA VRFLSVSDTH DTLLFFTNRG KVFSLRCFDI PDDSSRIAKG TAIVNLIPVT QDERITAILD LKSFPADHFL LMATNKGEIK KTSLQEFTAV RSSGLIAMDL TASDELVAAV ETIEEKDILL ATRLGQSIRF PVSELRTSLR ASGGVKAIVL SMEDEVVSMD VAQEGTMVIT VTENGAGKLT AIEEYPQQHR AGSGVINFKV VDKTGEVVAS KVVSVTDQMM LISADGMVTR TQVKEEDPSH GIPIMGRATQ GVRVMRLEEG DRVVAVATF
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