Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1374 |
Symbol | |
ID | 5132028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1329026 |
End bp | 1330858 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640530310 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001214829 |
Protein GI | 147670011 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACTACC CCGAACATAT TCTCCATCAG GTTGAAAAGC CCGGCCGTTA TACCGGCGGG GAATGGAATT CCGTTTGCAA AGAATGGGCT GATATCCCCC TGAAGGTTGC CCTGAGCTTT CCAGATACAT ATGAAATAGG CATGTCCAAC CTGGCCATAC CCCTGCTTTA CGATATTTTA AACCGCAACC CCAGTATACT GGCCGAAAGG GTATTTGCCC CCTGGCTGGA TATGGAAAAC CTTATCCGTG AGCACAACCT GCCTTTTGTC AGTCTGGAAA GCGGCCACCC ATTAAAAGAA TTTGATATTC TGGGCTTTTC ACTGGGATAT GAACTTACCT ATACCAATAT ACTGAATATG CTGTCTCTGG CCGGCATACC CATACTGGGA GCCGAAAGGG GAGGGGATTT CCCGCTGGTA ATTGCCGGGG GAAGCTGCAG CCTGAACCCT GAACCTTTGG CAGACTTTAT AGATGCTTTT GTAATAGGCG ATGCCGAAGA GGCAATAGAA GACCTGTGCA AAGGCTTTAT TGATGCTAAA AAACGCACTC TTTCCAAACC ACAGCTTCTG AGGGAGCTGG CCGAAATCCC CGGAATTTAT GTACCAAGCC TGTATCAGGC TGAATATAAC CCTGACGGAA CTTTAAAATC CATCACCCCA ACCGTACCTG AAGCGCCTTC GGTGGTGAAC CGCCGAATTT TGCCCACTTT GCCGCCGCCA ACCGTCAAAC CGGTAGTGCC CTATATAGAG GTGGTGCAGG ACAGGGGGGC AGTGGAGATA AGCCGGGGTT GCAGCCGGGG CTGTCGTTTT TGTTCGGCCG GCATTCTGTA CCGTCCGGTC AGGGTGCGCC CGGCGGAAGA GGTTATAACT GCAGTTGAAG GCATAATGGA CAACTGCGGT TATGATGAAA TTTCCCTGCT TTCGCTAAGC TGTTCGGATT ATCCGGGTAT AGAAGGTTTG GTAAAAACTC TGGCTGAAAA ATACGCAGAC AAACACCTTG CCCTGTCACT GCCCAGTTTA CGCCTGACCC CGGATTCGGT CAGTTTGGTA AATGTTCTGG CGGGTGCCCG AAAAAGCGGC TTAACCTTTG CCCCGGAAGC GGCCAGCCCG CGTCTGCAGA GGGTTATAAA CAAACTTACC TCTGAAGAAG AGTTGTGCGC TACTGCCCGA ACTGCCTTTG AAAGCGGCTG GACCAGCTTT AAGATGTATT TCATGATAGG ACTGCCGACC GAAACTGACG AAGATGCAAC CGCTATCTGC CAGATGGTGG GCAAGGTAAA CGCCCTGTCC CGAATCGCTC CCGGACGCCG CCCCCAGATA CGCCTGAGTC TGGCATCATA TGTACCCAAA GCCCATACCC CTTTCCAGTG GGAAGCCCAG CTGGACGAGG AATCTCTCTA CCGAAGGGCA GATATAGTCA GGCAGGGGCT GAAACGCTGG GGGATAAAGC TTTCCTGGTC TGATACCAGA ATGAGCCTGC TGGAAGCGGT ATTTTCCAGA GGAGACCGCC GTCTGGGCAG GGTGATATAC ACCGCCTGGC AAAAGGGTGC CAAATTTGAT GCATGGAGTG AATGTTTCAA TTTTTCTCTC TGGCAGGAGG CTTTTGACGA ATGCGGCTTA AACCCCTCAT TCTATGCCCA CCGCAAACGT TCATTAGATG AGACTTTGCC CTGGAATCAT ATAAATACGG GGGTAAGCGC CGAATTTCTG AAAAGGGAAT ATACCCGCTC GCTGGAAGAG CAGGATACTC CTGACTGCCG TGAAGGCAAA TGCCATGCCT GCGGGCTGGA AAAAGCGGTA ACGGAATGTG CCGACCGCCT GCATAGAAAA TAA
|
Protein sequence | MNYPEHILHQ VEKPGRYTGG EWNSVCKEWA DIPLKVALSF PDTYEIGMSN LAIPLLYDIL NRNPSILAER VFAPWLDMEN LIREHNLPFV SLESGHPLKE FDILGFSLGY ELTYTNILNM LSLAGIPILG AERGGDFPLV IAGGSCSLNP EPLADFIDAF VIGDAEEAIE DLCKGFIDAK KRTLSKPQLL RELAEIPGIY VPSLYQAEYN PDGTLKSITP TVPEAPSVVN RRILPTLPPP TVKPVVPYIE VVQDRGAVEI SRGCSRGCRF CSAGILYRPV RVRPAEEVIT AVEGIMDNCG YDEISLLSLS CSDYPGIEGL VKTLAEKYAD KHLALSLPSL RLTPDSVSLV NVLAGARKSG LTFAPEAASP RLQRVINKLT SEEELCATAR TAFESGWTSF KMYFMIGLPT ETDEDATAIC QMVGKVNALS RIAPGRRPQI RLSLASYVPK AHTPFQWEAQ LDEESLYRRA DIVRQGLKRW GIKLSWSDTR MSLLEAVFSR GDRRLGRVIY TAWQKGAKFD AWSECFNFSL WQEAFDECGL NPSFYAHRKR SLDETLPWNH INTGVSAEFL KREYTRSLEE QDTPDCREGK CHACGLEKAV TECADRLHRK
|
| |