| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1354 |
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| Symbol | |
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| ID | 5132253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1312921 |
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| End bp | 1314504 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530289 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001214809 |
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| Protein GI | 147669991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAGT TTTTTATGGA GACAGCGCCG GCTACCACCA CCGGTTTGCC TTTGTCTGCT
ATTCTGGCTA TCTTTTTCAG TTTTATTATA GGTATAGTGT TCGGCGGTAT GGCACTATTC
GTATTCAGGG GCTTCATTAT GAACCGCCAG CTTCGTATTG CCCAGCGTAA AGCTACCAAA
ATGCTGGCTG ATTCCAAACT GGAAGCTAAG GATGTGCTGG TGGAAGCCAA GCGCGAGGCT
GACAAGACTC GCAATTCCGC CGAAACTGAA CTTAAGGAAC GCCGTTCTGA ACTGGCCAAA
CAGGAAAACA GGGTTATCCA AAAAACAGAG GCGCTGGACC GCAAGCTGGA AAACCTTGAA
CAGCGTGAAC AGTCTTTAAC CAACCGGGAA AAAAGCATTG ACGAAACCCA ATCTCAAATT
GAAGAAATAC GCGAAAACGA ACTAAAACGC CTGGAAGAAG TGGCCAACAT GACCACTGAA
CAGGCCAAAA CGAGCCTGCT TGAAATGCTG GAAGGCGAAA TGCAACAGGA AACCTCCCGC
CGCCTGCGTG AGTGGGAGAT AAAAATAAAA GCCGAAGCGG ATGAAAAAGC CCGCGAGGTT
GTTTCCCAGG CTATCCAGCG TTGTGCCTCT GACGTAGTTA CCGAAACCAC CACTAATGTC
GTACCTCTGC CCAGTGACGA AATGAAGGGC AGGCTGATTG GCCGCGAAGG CCGCAATATA
CGGGCTTTGG AACAGGCAAC CGGCGTAGAC CTGATAATAG ATGACACCCC GGAGGCAGTT
ACTATTTCCA GTTTTGACCC GGTGCGGCGT GAAGTTGCCC GTCAGGCACT TTCAAAACTT
ATCATTGACG GGCGTATTCA CCCTGCCCGC ATAGAAGAAG TGGTAACCAA GGCCAAAGAG
GAAGTTGAAG CCGCTATGAT AGCTTCCGGT GAACAGGCTG CCTACCAGGC AGGCGTTCAC
GGACTGCGAC CCGAAATAAT CAAAGTAATG GGACGGCTGA AATACCGCAC CAGTTACGGC
CAGAATGTAC TTCAGCACAG CATAGAAGTA GCCCAGATGT CCGGCATGAT AGGCAGTGAG
CTGGGTGTAA ATGTTACCCT TGCCCGCCGG GCCGGCTTTC TGCATGATAT AGGCAAAGCG
GTTGACCGAG ACGTGGAAGG CACCCATACC CAGATAGGCG CAGACATGGT TAAACAGTGG
GAAAAATCTC CCGAAGTTAT TAAAGGTGTG GCGGAACATC ACTTTGACAC CCCCACCGTT
TCCATCTGGG GCTTTATAGT ATCTGCTGCA GATGCCATTT CTTCGGCCAG ACCCGGTGCC
CGCCGCGAAT CACTGGAAAA CTACATCAAA CGTCTGAAGG CTCTTGAAGA GATTGCCGAC
AGCTTCAAAG GGGTTGAAAA ATCCTTTGCT ATCCAGGCAG GACGTGAAGT GCGGATAATG
GTAAAACCTG ATGAGATTGA TGATCTGGGA GCTATGCGGC TGGCCAGAGA TATCGTCAAG
AGGATTGAAG ATGGTCTGGA ATACCCCGGA CAGATTAAAG TTACCGTTAT ACGGGAAACC
AGATCCGTAG ACTTTGCCAA GTAA
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| Protein sequence | MFEFFMETAP ATTTGLPLSA ILAIFFSFII GIVFGGMALF VFRGFIMNRQ LRIAQRKATK
MLADSKLEAK DVLVEAKREA DKTRNSAETE LKERRSELAK QENRVIQKTE ALDRKLENLE
QREQSLTNRE KSIDETQSQI EEIRENELKR LEEVANMTTE QAKTSLLEML EGEMQQETSR
RLREWEIKIK AEADEKAREV VSQAIQRCAS DVVTETTTNV VPLPSDEMKG RLIGREGRNI
RALEQATGVD LIIDDTPEAV TISSFDPVRR EVARQALSKL IIDGRIHPAR IEEVVTKAKE
EVEAAMIASG EQAAYQAGVH GLRPEIIKVM GRLKYRTSYG QNVLQHSIEV AQMSGMIGSE
LGVNVTLARR AGFLHDIGKA VDRDVEGTHT QIGADMVKQW EKSPEVIKGV AEHHFDTPTV
SIWGFIVSAA DAISSARPGA RRESLENYIK RLKALEEIAD SFKGVEKSFA IQAGREVRIM
VKPDEIDDLG AMRLARDIVK RIEDGLEYPG QIKVTVIRET RSVDFAK
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