| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1347 |
|---|
| Symbol | |
|---|
| ID | 5131218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 1308473 |
|---|
| End bp | 1308709 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640530282 |
|---|
| Product | sec-independent translocation protein mttA/Hcf106 |
|---|
| Protein accession | YP_001214802 |
|---|
| Protein GI | 147669984 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.11286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGA TTGGCCCTAT AGAAATACTT ATCATTGTAC TCCTAGTTGT GGTGGTATTC
GGTGCCAGCC GTATTCCTAA AGTAGGCGAA TCACTGGGTA AAGCACTGCA TAATATCCGC
AAGAAGAACG ACTTTGAAGA AGAAACCCCC AAACCGAAGG TTGTTAAAAA ACTTGAGGAT
GATGCGGTTT CTGCCAAGAT AAATGAAAAG ATAGCTGAGA CTAAAAAAGA GTCTTAA
|
|---|
| Protein sequence | MPKIGPIEIL IIVLLVVVVF GASRIPKVGE SLGKALHNIR KKNDFEEETP KPKVVKKLED
DAVSAKINEK IAETKKES
|
|---|
| |