Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1339 |
Symbol | |
ID | 5131538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1300804 |
End bp | 1301466 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530274 |
Product | methyltransferase type 11 |
Protein accession | YP_001214794 |
Protein GI | 147669976 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0184467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGACA AAGTTACTCC GCCCTCCTAT TACAAGACAG ATTACTGGAA ACGTTATTCC AAAGTTTACG ATTTTTTAAC CCGCTTGCTT TTTACGCCTT TCGGCGGGGA AGAACGCTTT CGCCGCAAGT TTGTAGATGC GGCAAATATC CAGCCCGCAG ACAATATTAT TGATATGTGC TGCGGCACAG GTGCGACTAC CCGTCTGGTA GCCGGAAAAC TGAAGGGCGG TCAGGTAACA GGTGTTGACC TTTCCCTGGA TATGATGGCC AGAGCCAAAG AAAAGGTAGT GGGCATGCCG GCTGTTTTCC AACAGGCTTC GGGTGACAAT CTGCCCTTCC CTGAGGGTGC TTTTGACAAG GTCTTTGTAT CTTACGGGCT GCACGAAATG CCCACCCCTA TCCGCTGTGA AGCGATTAAA CAGGTTTACA AAGTGCTTAA GCCGGGGGGT GTTTTCAACG TACTGGACTA TAATCTGCCA CAGGGTATCG GCGGACTTGG TATCAGGGTA TTTATACGGG TGTTTGAAGG TCTGCCTGCC TACCAGATGA TGCAGCCGGG AGTACTAAGC GGTGAACTAA AGGATGCCGG GTTTGAAATC CTGAACCGCC GCCAGCGTCT TTTAGGCATG TTTCAGATAA TTCAGGCGCG TAAACCGCTT TAG
|
Protein sequence | MQDKVTPPSY YKTDYWKRYS KVYDFLTRLL FTPFGGEERF RRKFVDAANI QPADNIIDMC CGTGATTRLV AGKLKGGQVT GVDLSLDMMA RAKEKVVGMP AVFQQASGDN LPFPEGAFDK VFVSYGLHEM PTPIRCEAIK QVYKVLKPGG VFNVLDYNLP QGIGGLGIRV FIRVFEGLPA YQMMQPGVLS GELKDAGFEI LNRRQRLLGM FQIIQARKPL
|
| |