| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1338 |
|---|
| Symbol | |
|---|
| ID | 5131707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 1299770 |
|---|
| End bp | 1300678 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640530273 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_001214793 |
|---|
| Protein GI | 147669975 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.270834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAG AGCTTATTTC GCACAAGATA GCGGAACTGA AAAAAGAGCG TAAGGCCATT
ATACTGGCCC ACAACTACCA GCTTGGAGAA ATTCAGGACG CAGCGGATTT TGTGGGTGAT
TCGCTGGAAC TGGCCCGTAA GGCGGCAAAG GTTGATGCCG GAGTAATAGT ATTTTGCGGA
GTTCACTTTA TGGCGGAAAC AGCGGCCATT CTCAGCCCCG AAAAGATAGT ACTTGCACCT
GAACCAAGGG CCGGTTGCCC TATGGCGGAT ATGATAAGCG GGGCGGAACT CAGGGAATTT
AAATCCCGTC ATCCCGGACT TCCGGTGGTA TGTTATGTTA ACTCTACAGC TGAGGTCAAG
GCCGAGTCGG ATATTTGCTG TACTTCGGCT AATGCCGTCA AAGTGGTGGA AAGCCTGAAA
TCAGATACAG TTTTGTTCGT ACCTGACCAG TATCTGGGGG CTTTTGTCAA AGAACGCACC
AGTAAAAAAA TAATAAGCTG GCCGGGCTAT TGCCCCAGTC ATGCACGCAT AAAACCAGAA
GATATTGTAA ACCTGAAAAA ACACTACCCT GCCGCCAGAG TAATAGTCCA TCCTGAAAGC
CGCCCTGAGG TAACTGCTCT GGCAGACGAG GTTTTATCCA CCGGGCAGAT GGTTAGCTAT
GCCACCCGGG CGGACGTCAA AGAGCTTATT GTAGGTACTG AAATAGGTAT GCTCTACCGC
CTGCGCAAAG AAAACCCGGA CAAGCTTTTT ATACCGGTAT CCGAACAGGC TGTGTGTGCC
AATATGAAAA TGACTACCCT GCCCAAACTT CTTGCTAGTC TGGAAAATAT GCAGACGGTA
GTAAGTGTAC CGGAAGAAAT TCGCGTTAAG GCAGTGGGTG CGGTGGAACG AATGCTGAGG
GTGGTATAA
|
|---|
| Protein sequence | MYRELISHKI AELKKERKAI ILAHNYQLGE IQDAADFVGD SLELARKAAK VDAGVIVFCG
VHFMAETAAI LSPEKIVLAP EPRAGCPMAD MISGAELREF KSRHPGLPVV CYVNSTAEVK
AESDICCTSA NAVKVVESLK SDTVLFVPDQ YLGAFVKERT SKKIISWPGY CPSHARIKPE
DIVNLKKHYP AARVIVHPES RPEVTALADE VLSTGQMVSY ATRADVKELI VGTEIGMLYR
LRKENPDKLF IPVSEQAVCA NMKMTTLPKL LASLENMQTV VSVPEEIRVK AVGAVERMLR
VV
|
|---|
| |