| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1328 |
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| Symbol | |
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| ID | 5131441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1292323 |
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| End bp | 1293312 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530262 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001214783 |
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| Protein GI | 147669965 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0300237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TAGTCAGCGG GGCTTCCGGC CGTATCGGCA ACGTGCTGGT CAGGGAGCTA
CTGAAATCCG GCTACGGGGT AAGAGCTTTG GTGAAGCCGG GAGATACCGC CCTGTCTATT
CAGGGGCTTG ATATTGAACG GGTGGAGGGT GACGTAACCG TTTATCCCTC TGTTTTGGAC
GGGCTAAAAG GGTGTGAGGC TGTTTTTTAT CTGGCGGGTA TTGTTTCCAT AATACCGGGG
CGGGAAAAAG AGCTTTATGA AACCAATATA AAAGGGGCAG CCAATATGGC TGATGCCTGT
CTGGAGTGCG GAATAACCCG CCTGCTTTAT ACTTCTTCAA TCCATGCCCT GTCCGAACCT
CCCCCGGGGA CAGCTTTTAC TGAAGAAGAG GGATATCATC CGTCTGATTT CCCGCCGGGT
TACAACCGGA GTATGGCTCA GGGGGCTCTA GAGGTGCTTA AGAGATTTTC AGCCGGGCTT
TCAGGTGTTA TTGTCTGCCC CAGTGGGGTT ATCGGTCCGT ATGACTATGA TCCTTCAGAA
ATGGGCAGAG TAGTGGTGGA CTACGCCAGG GGGAAAATGA GTGCTTATGT AGACGGGGGC
TACGATTTCG TAGATGTACG GGATGTAGCT ATAGGCATGA TATCCGCCTT TGAAAAGGGG
CAGGACGGGC AGAGTTATAT ACTCTCCGGC CAGTACGTCA GCATTAAGAG TTTGTTTGAA
ATACTGGGCA GGCTTAGCGG GCTTACTCCT CCCCGTCTCC GAGTACCTTA TATTCTTGCC
AAACTGGGTG CTTATATCAG TTATCCGTAT TACCGCCTGA CCCATAGCGC CCCTCTTTTT
ACAGCATATT CGTTAGATGT ACTGCGGAGC AATTCCAATA TCAGTTCTGC CAAAGCCCGC
TGTGAACTGG GGTTCTCCCC CCGTCTGGCG GAGGAATCTC TGGCAGACGC ATATTTGTGG
TTCAAATCCA AGGGTTATTT AAGTGATTAA
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| Protein sequence | MKVLVSGASG RIGNVLVREL LKSGYGVRAL VKPGDTALSI QGLDIERVEG DVTVYPSVLD
GLKGCEAVFY LAGIVSIIPG REKELYETNI KGAANMADAC LECGITRLLY TSSIHALSEP
PPGTAFTEEE GYHPSDFPPG YNRSMAQGAL EVLKRFSAGL SGVIVCPSGV IGPYDYDPSE
MGRVVVDYAR GKMSAYVDGG YDFVDVRDVA IGMISAFEKG QDGQSYILSG QYVSIKSLFE
ILGRLSGLTP PRLRVPYILA KLGAYISYPY YRLTHSAPLF TAYSLDVLRS NSNISSAKAR
CELGFSPRLA EESLADAYLW FKSKGYLSD
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