Gene DehaBAV1_1301 details

Gene Information

• Locus tag: DehaBAV1_1301
• ID: 5132373
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 1270368
• End bp: 1271063
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640530236
• Product: integrase catalytic subunit
• Protein accession: YP_001214758
• Protein GI: 147669940
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2801] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTGATA TCATTGAACT GGCTAGTAAG TACGGCAGGT ATGGTTATCG GCGAATCACA 
GCGTTACTCA ATGAAAGAGG CTGGAGAGTG AACCATAAAA GAGTAGAGAG AATTTGGCGT 
ACCGAGGGAC TCAGGGTGCC CAAGAAGCAG CCCAAGCGGA GTCGGCTATG GCTCAATGAC 
GGTTCGTGCA TCAGACTAAG ACCGGAGCGT AAGAATCATG TCTGGAGTTA TGATTTTGTC 
ACTGCCAGAA CCGCTGACGG CCGGGCTTTC CGGATGCTTA ATATCATCGA TGAATATACT 
CGTGAGTGTC TAGCCATAAC GATCAACCGG CGATTGACTT CAGAAGACGT CATAGACCAA 
CTCTTTAATC TATTCATTTT TAGGGGTATC CCGGAACATA TAAGGTCAGA CAACGGACCC 
GAATTTACCG CCAAAGCAAT ACGCAAGTGG TTGACCCGAC TTGGCATCAA GACTCTTTTC 
ATCGAACCCG GCTCTCCTTG GGAGAATGGC TACATTGAAT CATTCAACGG CAAACTGCGA 
GATGAATTAT TGAACTTGGA GATCTTTACT ACGCTTGCTG AAGCTCGGGT ATTGATTACT 
GACTGGAGGA GGCAGTACAA TCAAGTCCGG CCTCACAGCT CTCTTGGTTA TCGTCCTCCA 
GCACCGGAGG CAATAATGGC AGTGGTAACT ACTTAA 

 

Protein sequence

MADIIELASK YGRYGYRRIT ALLNERGWRV NHKRVERIWR TEGLRVPKKQ PKRSRLWLND 
GSCIRLRPER KNHVWSYDFV TARTADGRAF RMLNIIDEYT RECLAITINR RLTSEDVIDQ 
LFNLFIFRGI PEHIRSDNGP EFTAKAIRKW LTRLGIKTLF IEPGSPWENG YIESFNGKLR 
DELLNLEIFT TLAEARVLIT DWRRQYNQVR PHSSLGYRPP APEAIMAVVT T