| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1293 |
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| Symbol | |
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| ID | 5132300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1263745 |
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| End bp | 1265475 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530227 |
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| Product | small GTP-binding protein |
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| Protein accession | YP_001214750 |
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| Protein GI | 147669932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0370] Fe2+ transport system protein B |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0042575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG TCTTGCTTTT TGGCAACCCG AATGTGGGTA AAAGTGTGGT CTTTACCCGC
CTGACCGGTG TCCAAACCAT GTCTGCCAAT TATCCCGGTA CGACTGTAAC TTTCAGTCGC
GGCCAGATGA AGCTGGGTGA TGAAATTGCC GAGGTTATAG ATGTGCCCGG TTCTTATACC
CTTGAGCCTA CCTGCGAAGC GGAAACCGTG GCCAGACGGA TGCTGGACGA AGTGGCGGCT
GACAAAGAGG GTGAAGTAAT TATCCTGAAT GTGATAGATG CCACTAATCT GGAAAGAAAC
CTGTATCTTA CCCAGCAGCT TCTGGAAAGG GGTTTGCCTA CTGTTATCGC TATGAATATG
TGGGATGAGA CCCGCCACAA GGGCATAAAA ATAGAGCTGG ATAGGCTTTC GGAAATACTG
GACGTGCCCA TAGCTCCAAC CTCGGCTACC AGCGGCGAGG GTATAAAACA GTTGGTGGTA
CAGTTGCTTT CACCCCAAAT TCCTTCTCTG GCCGTACAGG GGCAGGATGA ACGCTGGCAA
CGTATCGGCG GTATTATTCA CCAAGTACAG CAAATAACCC ACAGACACCA CACCCTTGGG
GAAAGGCTGG CGGATGCCAG TGTGAGCCCT GTTTTGGGTG TGTTTATGGC TATGCTGATT
ATGGCGGCAG TTTTTCTGGT GGTCCGTTTT GTGGGCGAGG GGCTGATAAG TTATGTATTT
GACCCCATTT TCGATAACCT GTGGGCACCG GTAGTGCATT CTCTTTCCGA TGCTTTAGGC
GGCAGTGGTT TTCTGCACGG ACTGCTGGTG GGTAATGTGT CCGGCGGGGA AATAAACTTC
AAAGAGTCTC TGGGACTCCT TACCAGCGGT TTGTATGTGC CGTTTGCCAT GGTTTTGCCG
TACATAGTAG CCTTTTATTT GGTTTTGGGC ATACTGGAAG ATACCGGCTA TCTGCCCCGT
CTGGCGGTGC TGCTGGACAA TGTAATGCAC CATTTGGGCC TTCATGGATT TGCCTTTATA
CCCACTTTGC TGGGTTTGGG CTGTAACGTG CCGGCTATTA TGGCTACCCG CAGCCTGGAA
AGCCGTCGTG AGCGTTTTAT TGCGGCTACT CTGGTCTCAG TGGCGGTGCC CTGCGTTTCT
CTGCAGGCCA TGATAATTGG CATGCTGGGG GGATTCGGGG TGGAGTATGT TTTTCTGGTG
TTCGGCACTC TGTTTGCGGT TTGGCTGGGG CTGGGTATGA TTCTGAACAA GATTACCCCC
GGTTTCAGTC CCGAACTCCT TTTGGAAGTG CCTCCCTATC GCCTGCCCCC TGTCAATCTG
GTATTTAAAA AGCTGGCCTT CAGGATTAAA AGTTTTCTGA AAGAGGCTTT GCCTATCATA
CTGGGGGTAG TGGCAGTTAT AAATATACTA AATTTCACTA AAGTATTTGA TGTTATCGCC
AAGGTGGCTG AGCCGGTGGT GACCGGCATT CTGGGTTTGC CGGCTGAAGC GGCTGTGCCT
CTGGTGGTGG GTTTTTTGCG TAAGGATGCG GCTATGGCGC TGATGGGTCC TCTGGATATG
GGGCCTGAAC AACTGGTGGT TGCCAGTTTG GTGCTGGCCA TGCTGTTTCC CTGCATTGCT
TCGCTGGTAA TACTTTTCCG CGAACTGGGA AAGAGAGATG CTTTAAAATC AGTACTGGTC
ATGCTGATTG CGGCTTTCGG GGTGGGCGGG TTGATGAATC TTATTCTCTG A
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| Protein sequence | MKKVLLFGNP NVGKSVVFTR LTGVQTMSAN YPGTTVTFSR GQMKLGDEIA EVIDVPGSYT
LEPTCEAETV ARRMLDEVAA DKEGEVIILN VIDATNLERN LYLTQQLLER GLPTVIAMNM
WDETRHKGIK IELDRLSEIL DVPIAPTSAT SGEGIKQLVV QLLSPQIPSL AVQGQDERWQ
RIGGIIHQVQ QITHRHHTLG ERLADASVSP VLGVFMAMLI MAAVFLVVRF VGEGLISYVF
DPIFDNLWAP VVHSLSDALG GSGFLHGLLV GNVSGGEINF KESLGLLTSG LYVPFAMVLP
YIVAFYLVLG ILEDTGYLPR LAVLLDNVMH HLGLHGFAFI PTLLGLGCNV PAIMATRSLE
SRRERFIAAT LVSVAVPCVS LQAMIIGMLG GFGVEYVFLV FGTLFAVWLG LGMILNKITP
GFSPELLLEV PPYRLPPVNL VFKKLAFRIK SFLKEALPII LGVVAVINIL NFTKVFDVIA
KVAEPVVTGI LGLPAEAAVP LVVGFLRKDA AMALMGPLDM GPEQLVVASL VLAMLFPCIA
SLVILFRELG KRDALKSVLV MLIAAFGVGG LMNLIL
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