| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1284 |
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| Symbol | |
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| ID | 5132106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1256426 |
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| End bp | 1258057 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530218 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001214741 |
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| Protein GI | 147669923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAAAA ATTGGAAAAA GTTTAAGAAA GTCTGGCTTA TCGGTCTGGC GGCAGTGATA
TCGCTAAGCC TGTTTGCTGG CTGTGAGCAG ACAACACCCA ATGCAGATGA TACTGCCACG
GCTATTACCC TGAAGGTCGG TTCTACCAAA CCCTTCAAGA CGACCAACCG CTTCAGTGAC
TACTGGTACG GGGTGTTGAC TAACCTGACT ACCCATGACA GCCTGATAAG GCTGGGGGAT
GACATGTCCA TCAAGCCCTG GCTGGCCAAA TCATGGACAG TGTCAGATGA CGCTAAGACA
TTTGTTTTTA CCATTGCGGA TAATGCCTAC TGGCATGACG GCACTAAGCT GACGGCTGAA
GATGTGGCCT TTTCTGTGGA ATACTACCGT GATTACATTG CTTCGGCCAG CTGGATGAAA
GATGTAATAG CTGATGTCAG CTTTTCGGGG GATACAGTTA CCCTTTCTCT GTCCCGTCCC
TACGGTAACC TTCTGACCGA ATTTATGACC TATTCCATTG TCCCCAAACA TATCTGGCAG
GATGTGACTG ACCCGCTTAA GTATAACCAG ACGGATATGA CAGTCGGTTC GGGTCCGTTC
GTATTTGAAA GTTTTGACCT TTCTTCCGGC AAGTTTATTT TCAAGGCTAA CGAAGACTAT
TTTCAGGGCA AGCCCACCAT TGACCGCCTT GAGGTGGATA TTTACCAGAA TATGGATGCT
TTGGTTTTAT CACTTGCCAA AGGTGATATA GATACCTGGT GGGATTATTC CGGGACTTTC
CCCTATACCA GCATACCCGC CCTGATAAAG TCCGGTAAGG TAGACTTTGA GACCAGCACC
TATCTGGGTG TGCCCTCTGC TCTGGGTTTT AACCTTGAAG ACGGCCCTGC CAGCGATATA
AATGTCCGCA AGGCTATTGC GGCGGCTATA AACTACCAGC AGATAATAGA ATACTTTTAT
GCGGGCTACG GTAGTGTGCC TACCACCGGT TTTGTTCCCC CCACCCACCC CAATTTCAAT
GCTGACCTGC CTTCTCTGGC ATATAATCCT GCAGAGGCCA ATGCCCTGCT GGATGCGGCC
GGACTGCTGG ATACAGATGG GGATGGTATC CGTGAGGATT CATCCGGACA GAATATTTCC
CTGAGACTGC TGGCCAGATC TGACCAGTCT ACCAATATGC GTCTGGCTGA AATACTGCGG
GATGCCCTGT CTGAGATTGG GCTTGGGGTA GAGATAAGAG CCCTGGACCT TTCGGCTTGG
GCTTCGGTAA AAGATGCACT TGACTACGAT ATGGTTCTGT TCGGGGCTAC TCCTTGGGGT
ACTCTGATGC ATGCCGGGCA TGGTTCGGGG TACTTTGACT CCAGACGTAC CGGTCAGGGT
GTTTTGCACA ATCTGGACGC GGCTGAATAT CTGGCCGCTT GTGACGCCAG ACTGGCTACG
GCTGACCCTG CCCAACAGGC GGTGCTTGGC CTCCGGATAC AGGAACTTAC CGCCGAGTAT
CTGCCGGGTA TTGCCCTGGC CTGGACTGAG AGTGTCTACC CTTACCGGCA GGGTTGGTCA
GGCTGGGTGA TAGATAGTAT CTATGGCGGG GTGTTTAACG GATTTTCCTT CTTGAGTGTC
CAGTCCCCCT AG
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| Protein sequence | MIKNWKKFKK VWLIGLAAVI SLSLFAGCEQ TTPNADDTAT AITLKVGSTK PFKTTNRFSD
YWYGVLTNLT THDSLIRLGD DMSIKPWLAK SWTVSDDAKT FVFTIADNAY WHDGTKLTAE
DVAFSVEYYR DYIASASWMK DVIADVSFSG DTVTLSLSRP YGNLLTEFMT YSIVPKHIWQ
DVTDPLKYNQ TDMTVGSGPF VFESFDLSSG KFIFKANEDY FQGKPTIDRL EVDIYQNMDA
LVLSLAKGDI DTWWDYSGTF PYTSIPALIK SGKVDFETST YLGVPSALGF NLEDGPASDI
NVRKAIAAAI NYQQIIEYFY AGYGSVPTTG FVPPTHPNFN ADLPSLAYNP AEANALLDAA
GLLDTDGDGI REDSSGQNIS LRLLARSDQS TNMRLAEILR DALSEIGLGV EIRALDLSAW
ASVKDALDYD MVLFGATPWG TLMHAGHGSG YFDSRRTGQG VLHNLDAAEY LAACDARLAT
ADPAQQAVLG LRIQELTAEY LPGIALAWTE SVYPYRQGWS GWVIDSIYGG VFNGFSFLSV
QSP
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