| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1278 |
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| Symbol | trpA |
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| ID | 5131678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1250986 |
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| End bp | 1251753 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530212 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001214735 |
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| Protein GI | 147669917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTA TCAGTGATGC ATTCCAAAAA CGAAAATCTC TTATAGCTTA CATAACAGTC
GGCTACCCGG ATATTGAAAC CACCCTGCGG CTGGTGCCTC TGCTGGAAGA AAACGGGGTG
GATATTATAG AGCTGGGTAT TCCCTTCTCA GACCCGCTGG CAGACGGAGT TACTATTCAA
AATGCCAGTT ATCAGGCACT CCAGAACGGG GTGACGCCTG AAGTCTGTTT ATCTGTTGCC
GCCCTGCTCA AAGAAAAAAT CTCCATACCC ATGGTATTCA TGGGCTATTA TAATCCCATT
TACAACTACG GACTGACCAA GTTCTGCCAA AAGTGTGCAA CTGCGGGTGT AAGCGGATTT
ATTATTCCTG ACCTGCCGCC GGGAGAAGCC CAAGACATAG ACTTTGCCGC CAGAGAAGCC
GGCTTGGATA TAATCTTTCT GTTAGCCCCC ACCAGTACCG ACGAACGGAT TAAGCTAGTT
GCCGCCAAAT CACGGGGGTT TATTTATCTC GTTTCCCACT CAGGCGTTAC CGGGGCAACT
GCCAACTTGC CGGCTGATTT GAGCAGTTTT GTAAACAGGG TAAGGAAAAC CGCCCGCCAG
CCTCTGGCAG TGGGCTTTGG TATTTCAACC CCCGAACAAG CCCAAAATAT CGCAAAATTT
TCCGACGGGA TAATAGTAGG CAGCCGTATC CTGCAGCTTG TCCAGACAGA CCCTTCACTT
GAAAAAGTAG CCACATTTAT CAGGCAACTC AGACAATCAT TAGACTAA
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| Protein sequence | MSRISDAFQK RKSLIAYITV GYPDIETTLR LVPLLEENGV DIIELGIPFS DPLADGVTIQ
NASYQALQNG VTPEVCLSVA ALLKEKISIP MVFMGYYNPI YNYGLTKFCQ KCATAGVSGF
IIPDLPPGEA QDIDFAAREA GLDIIFLLAP TSTDERIKLV AAKSRGFIYL VSHSGVTGAT
ANLPADLSSF VNRVRKTARQ PLAVGFGIST PEQAQNIAKF SDGIIVGSRI LQLVQTDPSL
EKVATFIRQL RQSLD
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