| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1277 |
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| Symbol | |
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| ID | 5131630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1249790 |
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| End bp | 1250989 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530211 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001214734 |
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| Protein GI | 147669916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAG TAGATAGCAC CGGTAAACCG GGGTATTTCG GCAAGTATGG CGGGCAGTTT
GTACCTGAAA TACTGGTGCC AGTCCTAAAC GAACTGGAAC AGGCTTATGA ACAAGCCAAA
AAAGACGAGA CTTTCCAGTC ACGCCTGAAA TCCCTTTCAA ACACCTTTTC GGGGCGGCCC
ACTCCGCTGT ATCTGGCAGA AAGGCTGACT GAACATCTGG GGGGTGCCAG AATTTACCTG
AAAAGGGAAG ACCTGGCCCA TACAGGTGCC CATAAAATCA ACAACGCACT CGGTCAGGGG
CTGCTTGCCT TGCATATGGG AAAGAAAAGG GTAATTGCCG AAACAGGGGC GGGGCAACAC
GGGGTAGCCA CCGCAGCTGT TTGCGCCATG CTGGGGCTGG AATGCATTGT CTATATGGGC
GAAGATGACA TCAAACGTCA AGCCTTGAAC GTATTCCGCA TGAAGCTGAT GGGAACGGAA
GTCAGAAGCG TATCTTCGGG CAGCCGTACC CTGAAAGACG CCATCAATGA AGCTATGCGT
GACTGGGTAA GCAACCCGGA GACCACTTAT TATATAATCG GTTCGGTGGT CGGCCCGCGC
CCTTATCCGG CTATGGTACG GGATTTTCAG GCAGTTATCG GGCAGGAAAC CAAAGCCCAG
TCCTTAAGAC AGCTGGGGGG ACTACCTGAC TGCATTGTTG CCTGTGTTGG CGGAGGCAGC
AATGCCATGG GTATTTTCTA TGATTTCATA CCAGACCAAA GCGTACGTCT TATCGGGGTG
GAAGCTGCCG GCAGCGGCAT CAGCACCGGC AAACATTCAG CCACCCTTAG TGCCGGCAAG
GTGGGTATAC TCCACGGCGC CATGTCCTAC CTGCTTCAGG ACGAGCATGG ACAGGTGATT
GAAACCCACA GTATTTCGGC CGGGCTGGAT TATCCCGGCG TAGGCCCTGA ACACAGCTAC
CTGAAAGATA ATAAGCGGGT GGAATATGTT TCGGTCACAG ATGAAGAAGC CCTGAACGGC
TTCAAACTGC TCTGCTCGCT GGAAGGGATA ATGCCTGCTC TGGAATCTTC CCACGCCATT
GCCCATGCCC TGAAAATAGC AGGCGGCATG CCGAAAAACA AAAATATAGT CATAAACCTC
TCCGGCAGAG GGGACAAAGA CATGGATATT GTTCAAAAAG CAATGGGGGT AAAGATATGA
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| Protein sequence | MPKVDSTGKP GYFGKYGGQF VPEILVPVLN ELEQAYEQAK KDETFQSRLK SLSNTFSGRP
TPLYLAERLT EHLGGARIYL KREDLAHTGA HKINNALGQG LLALHMGKKR VIAETGAGQH
GVATAAVCAM LGLECIVYMG EDDIKRQALN VFRMKLMGTE VRSVSSGSRT LKDAINEAMR
DWVSNPETTY YIIGSVVGPR PYPAMVRDFQ AVIGQETKAQ SLRQLGGLPD CIVACVGGGS
NAMGIFYDFI PDQSVRLIGV EAAGSGISTG KHSATLSAGK VGILHGAMSY LLQDEHGQVI
ETHSISAGLD YPGVGPEHSY LKDNKRVEYV SVTDEEALNG FKLLCSLEGI MPALESSHAI
AHALKIAGGM PKNKNIVINL SGRGDKDMDI VQKAMGVKI
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