Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1262 |
Symbol | |
ID | 5131552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1236161 |
End bp | 1236544 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640530193 |
Product | secreted protein-like protein |
Protein accession | YP_001214719 |
Protein GI | 147669901 |
COG category | [S] Function unknown |
COG ID | [COG5513] Predicted secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TTGCGGGTTT GATACTTAGT CTGGTTTGCG CTTTCAGTTT GGCTTTTTCC GGTTGCAGTG CTCAGGTAAA AACTTATACC GCCGATGATA CCCTGATAGA GTGCCATACC GGTGACGAAT TTATAGTAGC CCTGACGTCT AATCCCAGCA CCGGGTATAG CTGGGATTTT GAATCGGTCA GTTCTAAAAT ATATCTGGTT GAAAAAACCT ATACGCCTGA TAATGCTGAT ACCGCTCTGG TCGGAAGCGG CGGAACCGAA TATTTCCGCT TCAGGGCTTT GGATAAAGAA CAGACCGAAC TCTGGTTTTA CTATTCCCGT CCGTGGGATG CTGTACCTCT GGAAACGTTA GTTATAAACC TGAAGGTTTC CTAG
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Protein sequence | MKKFAGLILS LVCAFSLAFS GCSAQVKTYT ADDTLIECHT GDEFIVALTS NPSTGYSWDF ESVSSKIYLV EKTYTPDNAD TALVGSGGTE YFRFRALDKE QTELWFYYSR PWDAVPLETL VINLKVS
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