| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1256 |
|---|
| Symbol | |
|---|
| ID | 5131618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1232550 |
|---|
| End bp | 1233401 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640530187 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001214713 |
|---|
| Protein GI | 147669895 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00133666 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAG ATTTTCATAC CCATATTTTC CCTCCCGAAA TCATTGCAGC CCGGCAGGAA
TACACCTGCC GGGACAGCTG CATGGGGCTG CTTTATTCAA ACCTCAAAGC CAGAATGATA
ACCGCAGACG AGTTGGTAGC GGCACTGAAT GAAGCCGGCG TGGATAGGGC AGTGGCACTG
AATATCGGCT GGGATTCAGA TGAACTGTGT ACATTTACCA ATAACTACCT GCTGGAATCT
GCCCGCCGTT ACCCTGAAAG GATTATTCCG TTTTGTGCTT TACCCATTTC AAACCCGTCT
GCCAGCCTTA ATGAGCTGGA ACGCTGCCTC AGTCTGGGGG CAAAGGGTAT AGGCGAACTC
CGTACCGAAC GGCCGGAAGA ACTGGCTCTT CCGCCATATC AACCCTTGTT TGAGCGTATA
GCACAGAGGG GCTTGGTTTG CCTGTTTCAT GCTTCAGAGC CACTGGGGCA TATCTATCCC
GGAAAAGGTC TTGCCACTCC GGAAAGGTTT TACCCGTTTA TTTCCCGATA CCCCAAGCTT
AAACTGGTAC TGGCCCATCT GGGCGGGGGC ATGCCCTTTT ACCACCTTAT GCCGGAAGCC
GCCAAGGTGC TTTCAAACAC CGCCTATGAC ACCGCGGCCG CCCCTTTCCT GTACAACCCT
GAAATTTATC AGCAGGTGAT AAAACTGGCC GGAGAGACTA AACTCCTTTT CGGCAGTGAT
TACCCCCTCA TGCCTTATGA CCGAACCTTA AAACACCTAC TAGATGGACG GCTTGAACCT
GACATACAGG CAAAGATACT GCGGCAAAAC GCACTTGACT GGTTAAATAA AGGGGAAACG
GATCTTGGCT GA
|
|---|
| Protein sequence | MIIDFHTHIF PPEIIAARQE YTCRDSCMGL LYSNLKARMI TADELVAALN EAGVDRAVAL
NIGWDSDELC TFTNNYLLES ARRYPERIIP FCALPISNPS ASLNELERCL SLGAKGIGEL
RTERPEELAL PPYQPLFERI AQRGLVCLFH ASEPLGHIYP GKGLATPERF YPFISRYPKL
KLVLAHLGGG MPFYHLMPEA AKVLSNTAYD TAAAPFLYNP EIYQQVIKLA GETKLLFGSD
YPLMPYDRTL KHLLDGRLEP DIQAKILRQN ALDWLNKGET DLG
|
|---|
| |