| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1243 |
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| Symbol | |
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| ID | 5131594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1223866 |
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| End bp | 1224903 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640530169 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001214700 |
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| Protein GI | 147669882 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase
[TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCTA TTACCATTAC GGAGGCAAAC TTGGATAAAA CTAAGATATT ACTGGCCCAT
GGTTCGGGCG GACGCCTGAC CCATGACCTT ATTTCCAAAT ACCTTGTCCA ATCCCTGTCA
AACCCGCTTT TAAACAAGCT GGACGACGCG GCTGTTTTTA AAACCGGGGG CAATATGGCT
TTTACCACCG ACAGTTACGT GGTAAGCCCC ATTTTCTTTC CCGGCGGCAA TATAGGCAAA
CTGGCAGTCT GCGGTACGGT AAACGACCTG TCTGTCATGG GGGCTGTCCC CAAATACCTC
AGCCTGTCAT TTATCATTGA GGAAGGGCTG GACATAACCG TTCTGGAGGA AATCATAAAA
TCCATTGCCG CTGCCGCTAA AGAAGCCGGG GTAGAAATAG TGACCGGAGA CACCAAGGTA
GTCAATATCG GCAAAGCTGA CAAGATATTT ATAAATACGG CCGGGGTAGG CTTCATACCC
GAAGAGCTGG ATATATCCGG TTCCAACGCC CAGCCGGGTG ATGCGGTAAT TGTATCCGGC
ACTATGGGTG ACCATGGTAT TGCCATTATG GCTCAGCGTG AAGGACTGAA CTTTAAAATA
GCAGTTGAAA GTGACTGCGC TCCTTTAAAC GGGCTGATAG CCGATATGCT TAAAGCCTGC
CCCCGAATAC ACGTCATGCG TGACCCCACC AGAGGCGGGC TGGCCACCAC CCTTAACGAA
ATAGCCGCCC AATCACAGGT AGGTATAGAG CTTGACGAAG AGTCCATACC TGTCAAACCG
GCAGTGGGCG GTGCCTGCGA TGCGCTGGGG CTTGACCCGC TGTATGTAGC CAATGAAGGC
AAGCTGATAG CTATCCTGCC TGAGGAATTC GCACCAAAAG TACTTTCGGC TATGAAAGCC
CATCCGTACG GAGTAGACAG TGCCGTTATC GGGCGGGTCA CTGCCAAAAA CCCGTCACGG
GTCAGCATCC GCACCCCGCT GGGGGCACTT CGGATACTGG ACATGCAAAG CGGCGAGCTC
TTGCCCCGCA TCTGCTAG
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| Protein sequence | MPPITITEAN LDKTKILLAH GSGGRLTHDL ISKYLVQSLS NPLLNKLDDA AVFKTGGNMA
FTTDSYVVSP IFFPGGNIGK LAVCGTVNDL SVMGAVPKYL SLSFIIEEGL DITVLEEIIK
SIAAAAKEAG VEIVTGDTKV VNIGKADKIF INTAGVGFIP EELDISGSNA QPGDAVIVSG
TMGDHGIAIM AQREGLNFKI AVESDCAPLN GLIADMLKAC PRIHVMRDPT RGGLATTLNE
IAAQSQVGIE LDEESIPVKP AVGGACDALG LDPLYVANEG KLIAILPEEF APKVLSAMKA
HPYGVDSAVI GRVTAKNPSR VSIRTPLGAL RILDMQSGEL LPRIC
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