| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1242 |
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| Symbol | |
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| ID | 5131596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1222809 |
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| End bp | 1223903 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640530168 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001214699 |
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| Protein GI | 147669881 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTCA TAGAGGAATT CCGAAACAGC CAGTCAGGGC GTACCCTGCT GGAATACATA
AATAAACGTT CCACCAAGCC TGCCCGCTTT ATGGAGTTTT GCGGAGGGCA TACCGTAGCC
ATTTTCCGTT ACGGCATCCG CCAGCTGCTG CCGCCCCATA TTGAAATGCT GTCAGGACCG
GGCTGTCCTG TCTGTGTAAC CTCTACTGCC GATCTGGACA AAGTCATAGC CCTGTCCAGA
CTGACCGGGG TCATCATCTG CTCATTCGGT GATCTTTTGC GGGTTCCCTC CAGCCGCCAA
AGCCTGCTGG AAGTGCGGGC GGAAGGGGCA GACGTACGTA TTGTTTACTC TACCATGGAC
GCACTGGAGA TAGCCCGCCA AAACCCTGCC AAAAAGGTTA TCTTTGTGGG TATAGGCTTT
GAAACCACCG CCCCCACCAT TGCCGCTTCG GTAATTCAGG CGCGTAATCA AGGGCTTGAT
AATTATTATG TAATGTCGCT CCATAAAATA ACCCCTCCCG TCATGCGGGC TATACTGGAC
GCGGGTGAAA CCCGTCTTTC GGGCATAATC TGCCCCGGAC ACGTTTCTTC CATCACCGGC
AGTAACGCCT GGGAGTTTAT CCCTAAAGAC TACCATCTGG CCTGTGCCGT TTCCGGTTTT
GAAAGCCTGG ACATACTCTA CTGTGTCAAG TCACTGGTAG ACCAAGTGGA GGACAAAACT
CCCCGTCTGG ATGTCAGCTA TTCACGGGCA GTCAAACCCG AAGGCAACCT TGCCGCCCTG
AAGATTATGG ACGAAGTATT TGATATCTGC CCGGCCAACT GGCGCGGCAT AGGTATTTTG
CCCGAAAGCG GTCTCTGCCT GAAACCAGAA TTTGCCGCTT TTGATGCTGA GAAAAACTTT
GAAATAAAAC TCTCCGAACC CAGCCGCGAA ACACCCGGCT GTTTGTGCGG CGAGATTATT
AAGGGCACCC GGACACCTCT GGAATGCAAG CTGTTTTCAA AGGTTTGCAC CCCGGAAAAT
CCGGTCGGGC CGTGCATGGT CTCATCTGAG GGCACTTGTG CCGCCTATTA CCATTACGGA
GGCAAACTTG GATAA
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| Protein sequence | MNFIEEFRNS QSGRTLLEYI NKRSTKPARF MEFCGGHTVA IFRYGIRQLL PPHIEMLSGP
GCPVCVTSTA DLDKVIALSR LTGVIICSFG DLLRVPSSRQ SLLEVRAEGA DVRIVYSTMD
ALEIARQNPA KKVIFVGIGF ETTAPTIAAS VIQARNQGLD NYYVMSLHKI TPPVMRAILD
AGETRLSGII CPGHVSSITG SNAWEFIPKD YHLACAVSGF ESLDILYCVK SLVDQVEDKT
PRLDVSYSRA VKPEGNLAAL KIMDEVFDIC PANWRGIGIL PESGLCLKPE FAAFDAEKNF
EIKLSEPSRE TPGCLCGEII KGTRTPLECK LFSKVCTPEN PVGPCMVSSE GTCAAYYHYG
GKLG
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