| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1239 |
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| Symbol | |
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| ID | 5131592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1219645 |
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| End bp | 1220298 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530165 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001214696 |
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| Protein GI | 147669878 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA AAGTTCTTAA AAATATAACC GATATGAATG ACCAGCTGGC CACCCGAAAC
AAGCATATGT TTGCCGACAA AGGCATACTG GTTATAAATG TCATGTCTTC GCCCGGTGCC
GGCAAAACCA GTCTGCTTTT AAAGACTATC GAGCTGCTGG GGAATGATGC CCGGGTGGGT
GTGATAGAGG GTGATATTGC CTCAAGCGTA GATGCCGAAA AGATAGCCGC AACCGGCTCG
CAGGCTATCC AGATAAATAC AGATGGGGGT TGTCACCTTG ACGCCAACAT GGTTGCAACC
GCCGCAGACG GGCTGGAACT GGACAAACTG GATATCATTT TTATTGAAAA CGTGGGTAAT
TTGGTCTGCC CGGCCGGTTT CCAGCTGGGT GAAGCCAAAA GGGTAGTTCT GGCATCCGTG
CCGGAGGGTG ATGATAAACC AACCAAATAC CCCTTTATGT TCAGAGATAC AGACGTAATA
GTCATAACCA AAATGGATTA CCTGCCCCTC AGTGATTTCA ATATGGAATC CTTCCGCAAA
ACAGTGCTGG GTCTCAACCC GGACGTCAAA ATAATTGAGC TTTCAGTAAG GAATGGACAA
GGGCTGGACG AATGGATAGC CTGGCTGAAA AGCAACCTTT TACAGAGGCA ATAA
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| Protein sequence | MKVKVLKNIT DMNDQLATRN KHMFADKGIL VINVMSSPGA GKTSLLLKTI ELLGNDARVG
VIEGDIASSV DAEKIAATGS QAIQINTDGG CHLDANMVAT AADGLELDKL DIIFIENVGN
LVCPAGFQLG EAKRVVLASV PEGDDKPTKY PFMFRDTDVI VITKMDYLPL SDFNMESFRK
TVLGLNPDVK IIELSVRNGQ GLDEWIAWLK SNLLQRQ
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