Gene DehaBAV1_1215 details

Gene Information

• Locus tag: DehaBAV1_1215
• Symbol: rho
• ID: 5131933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: -
• Start bp: 1193631
• End bp: 1194905
• Gene Length: 1275 bp
• Protein Length: 424 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640530141
• Product: transcription termination factor Rho
• Protein accession: YP_001214672
• Protein GI: 147669854
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000539864
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATCG GACAATTTGA ACTGAGTGAA CTTGAAAAGA AGACTCGCGA AGAGCTTCTG 
GACATTGCCA AAGAAATGGG TATAAACGGG GTAACTGCCC TTAAAAAGCA GGACTTGGTG 
ATGCGCCTTA TTCAGGTTTA TACCGAATCC CAAGGGAATG TATTTTGTTC GGGTATTCTG 
GAAATAATGC CGGACGGATA CGGATTCCTT AGACAGGCAT CTCTCCTGCC CAGCTCATCA 
GACATATATG TGTCTCAGTC CCAGATACGC CGTTTCGGAC TTCGCACCGG TGATATGGTA 
ATAGGCCAAG GGAGGCCGGC CAAGCCGGGT GAAAAATATT ACAGCCTTCT GCGGGTGGAA 
GCCATAAATG ACCTCAACCC CGAAATGGCC AAACGCCGCC CGAATTTTGG TGCTTTGGTT 
CCCACTTTTC CTGACCGCCT GATAAATCTG GAGACCTCTC CCACCGAACT TGCCACCCGC 
CTCATAAACC TGATAGCCCC CATAGGCAGG GGACAGCGCG GTCTTATTGT TTCCCCGCCC 
AAGGCCGGCA AGACCACCAT TTTGAAAAAC ATAGCTAATG CCACCGCTAC CAATTATAAC 
GATATACATA TAATGGTAGT CCTTATAGGT GAACGCCCTG AAGAAGTAAC CGATATGCGC 
CGCCACGTGC GGGGCGAGGT AATGGCCGCC ACCTTTGACG AACCGGTAGA AAACCAGACC 
CGGGTAGCCG AACTGGCACT GGAACGGGCC AAGCGCATGG TAGAGAGCGG CAAAGACGTC 
TTTATCCTGC TGGACGGCAT TACCCGCCTT ACCCGTGCCT ACAACTTGGC CATGCCCTCA 
TCAGGCCGCA CCCTTTCCGG CGGTATTGAC CCGGTAGCCC TCCACCCCGC CAAGAAATTC 
TTCGGGGCAG CCCGCAATAC CGAAGAAGGC GGCTCTCTTA CCATCATCGC CACCTGTCTG 
GTGGAAACCG GCAGCCGCAT GGATGACCTT ATTTATGAAG AGTTCAAAGG CACCGGCAAT 
ATGGAACTTC ATCTGGAACG CCGTTTGGCC GAACGCCGTG TATTCCCGGC TTTGGATATA 
CCCCGCTCAA GCACCCGCCG TGAAGAGCTT CTGCTGGGTG ACAACTACAA GCAGGTACAG 
CTCCTGCGGA GAATGGTAGC TATTATCGCT GATGACGCTA ACCACTTTAC AGAGGTTAAC 
GAGCGCCTGC TGGACCGCCT GCGCCGCTCC AAGAACAATG CTGAATTTTT GGCTAACCTT 
CAGAAGGAAA TGTAA 

 

Protein sequence

MEIGQFELSE LEKKTREELL DIAKEMGING VTALKKQDLV MRLIQVYTES QGNVFCSGIL 
EIMPDGYGFL RQASLLPSSS DIYVSQSQIR RFGLRTGDMV IGQGRPAKPG EKYYSLLRVE 
AINDLNPEMA KRRPNFGALV PTFPDRLINL ETSPTELATR LINLIAPIGR GQRGLIVSPP 
KAGKTTILKN IANATATNYN DIHIMVVLIG ERPEEVTDMR RHVRGEVMAA TFDEPVENQT 
RVAELALERA KRMVESGKDV FILLDGITRL TRAYNLAMPS SGRTLSGGID PVALHPAKKF 
FGAARNTEEG GSLTIIATCL VETGSRMDDL IYEEFKGTGN MELHLERRLA ERRVFPALDI 
PRSSTRREEL LLGDNYKQVQ LLRRMVAIIA DDANHFTEVN ERLLDRLRRS KNNAEFLANL 
QKEM