| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1213 |
|---|
| Symbol | |
|---|
| ID | 5131547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1189266 |
|---|
| End bp | 1189754 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640530139 |
|---|
| Product | exonuclease-like protein |
|---|
| Protein accession | YP_001214670 |
|---|
| Protein GI | 147669852 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3359] Predicted exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000173216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAT ATTTAGATAT TGAAACAACA GGCCTTTCAC CTTATCAGTC TGAGCTGACA
GTCATAGGTA TCCATCTGGT AAATGGCAGT TCGATACCGG GGCTGATTCA ACTGGTAGGC
AGAGAATGCA CTGCCGAAAA CGTAATGTCA TCTCTGGCAG GTGCAGATAC AATTTATACC
TATAATGGCA AGGGATTTGA CCTGCCGTTT ATTCACCGAA AACTTGGGAT AGACCTGAGC
CGCCATTTTA ACCATCGTGA CCTGATGTTT GACTGCTGGG CTAAAAACCT GAAGGGCGGA
TTAAAGAAAG TGGAATGCCA GTTGGGTATT CCCCGCCAGT TGACCGAGGT TAACGGATAC
GTAGCTGTCC AGCTATGGTG GAGTTACATA AACAAATCTG ATATCGGGGC ACTTGAAACA
CTGCTGGCCT ACAACCGTGA GGATATAGTA AATCTTAAAA CCCTTAAGGA CATGTTATTA
AATAACTGA
|
|---|
| Protein sequence | MEAYLDIETT GLSPYQSELT VIGIHLVNGS SIPGLIQLVG RECTAENVMS SLAGADTIYT
YNGKGFDLPF IHRKLGIDLS RHFNHRDLMF DCWAKNLKGG LKKVECQLGI PRQLTEVNGY
VAVQLWWSYI NKSDIGALET LLAYNREDIV NLKTLKDMLL NN
|
|---|
| |