| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1210 |
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| Symbol | |
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| ID | 5131539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1185813 |
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| End bp | 1186850 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530136 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001214667 |
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| Protein GI | 147669849 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000297014 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAACAT CACGGGCAGA GATAATACTG CGTTCTATAG TAAGGCAGTA TATAACCAAA
GCAGTACCGG TTTCGTCATC TTCCATACTG GAAGATTGCG GTTTGGACAT TTGTTCAGCC
ACCATACGGA ACGAAGTGGT ACGGCTGGAG ATTGAGGGTT ATATCCTTCG TCCCCATCAC
TCTGCCGGCA GCATTCCGGC TGATAAGGGA TACCGCTATT ACGTAGAATC CCTTAAAGAT
GTGGAACTGC CTACCAATGA CAAGTTTCTT ATCCGCCATC TTTTTCATCA GGTAGAAAAA
GAAATGGAGG AATGGCTTAA TCTGACAGTA GCTGTGCTTT CCCAGCGTGT ACAGAGTATG
GCAGTTGTTA CCATGCCCCG CCAGACCCAG GGCAAAGTGC ATCATATAGA GCTGGTCAGC
CTGCAGGATA ATCTGGTGCT GGTAGTCCTG ATACTTCGGG GAGCCAAGGT AAAACAGCAG
CTTGTAAACT TTGAGAATGT TGTTTCCCAG CCTGAGCTTA CGCTTATATC AAACCGCTTA
AATGACGCAT ATGATGGTCT GACCCGTTTC CAGATAGAGC AGAAACCGCT TGGTCTGAAC
CATGATGAAC TGAAGGTTAA GGACAGTCTG GTCAAGATGA TGCGGGGTGA AGATGAGCAG
GAAAGCCGTG AGCCCTTTTT TGACGGGCTG CATTATATGC TGGAACAGCC CGAATTTCAC
CAGAACCAGA GAGCTCAGGA GATAATGCAG CTGCTGGAGC AGAAGAAACT TTCCAAGATG
ATTGTACCGC CCATGCCTTT TAACCGGGGT GTACAGGTAT ACATAGGGCA GGAAAATGCC
TCTGCCGAAA TACGTGATTA CAGTCTGATA GTCAGCCAGT ACGGTATACC TGATGAAGCC
GTGGGCACTA TCGGGGTTAT AGGGCCTACC CGCATGGCCT ACGAAAGGGC ATTGTCGGCG
GTCAGTTATT TGTCTCTGGT TATGAGTACT CTGGTAGCCG AACTTTACGG CAAAGCGCCT
GTTGACAAAG ATGAATAG
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| Protein sequence | MLTSRAEIIL RSIVRQYITK AVPVSSSSIL EDCGLDICSA TIRNEVVRLE IEGYILRPHH
SAGSIPADKG YRYYVESLKD VELPTNDKFL IRHLFHQVEK EMEEWLNLTV AVLSQRVQSM
AVVTMPRQTQ GKVHHIELVS LQDNLVLVVL ILRGAKVKQQ LVNFENVVSQ PELTLISNRL
NDAYDGLTRF QIEQKPLGLN HDELKVKDSL VKMMRGEDEQ ESREPFFDGL HYMLEQPEFH
QNQRAQEIMQ LLEQKKLSKM IVPPMPFNRG VQVYIGQENA SAEIRDYSLI VSQYGIPDEA
VGTIGVIGPT RMAYERALSA VSYLSLVMST LVAELYGKAP VDKDE
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