Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1209 |
Symbol | |
ID | 5131550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1185200 |
End bp | 1185763 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530135 |
Product | GrpE protein |
Protein accession | YP_001214666 |
Protein GI | 147669848 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.177941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA GAAAAATGCA AGATAAAGAA GAAAATGAAC ACCCTGAAAA TACCCAGGCT AAAACTGATG GGCAACTGGA AAATCTGAAT ACCCAACTGG CAGAGGAAAA GAAGCGTTCA GAGGAATATC TGGATAGCTT AAAACGGGCC AGAGCTGAAT TTGTAAACTA CAAAAGGTAC ATAGAACAGG AAAGAAATAT ACAGGGTGAT ATGGCCAGAG GCAATGCCTT TATGCTGGTT CTGCCGGTAT TGGATGATTT GGAACGGGCT TTGACATCTG TTCCCGCCAA TATTGCCGGG CAACCCTTTA TAGAGGGTTT GGACCTGATC GTCCGCAAGT TTCAGGCCAT ACTGGATAAT CAGGGGGTCA AGGCTATTCC GGCCGCCGGA GAGCAGTTTA ATTCCCGCCT GCATGAAGCA GTTGCCTGTG AAGACGGGCC GGAAGGCATA ATTCTTCACG AAGCCCGCCG GGGTTATACG GTAGGGGATA GGGTACTTAG GACCTCGCTG GTGGTGGTGG GCAATGGAAG CCAGCCCTGC CAGCAAAATT CAGATATGAA ATAA
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Protein sequence | MTDRKMQDKE ENEHPENTQA KTDGQLENLN TQLAEEKKRS EEYLDSLKRA RAEFVNYKRY IEQERNIQGD MARGNAFMLV LPVLDDLERA LTSVPANIAG QPFIEGLDLI VRKFQAILDN QGVKAIPAAG EQFNSRLHEA VACEDGPEGI ILHEARRGYT VGDRVLRTSL VVVGNGSQPC QQNSDMK
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