Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1197 |
Symbol | mscL |
ID | 5131517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1171418 |
End bp | 1171882 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640530122 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_001214654 |
Protein GI | 147669836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.932903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG AGTTTAAAAT CTTTATCATG CGCGGCAATG TAGTAGATCT GGCTGTGGGT ATTGTAATTG GCGCAGCCTT CGGGGCTATT GTAAACTCAC TGGTAAAAGA TGTGCTGATG CCCCCTATCG GCTTGCTTTT GGGCAATGTT GATTTTGGCA ATCTGTTTAT CGTCCTTAAG GAAGGTGCCA TTGGCGGGCC GTATGAATCC CTGCTGGTTG CCCAAACAGC GGGCGCTGTA ACCATAAACT ACGGGGTATT TATTAACGCC TTAATCAACT TTTTAATACT GGCTATGGCT ATCTTCTTTT TTGTGGTAAG GCCGCTGAAC CAGCTGGCTG CCCGCCAGAA AAGTAAAGAA GCTGTCATTC CTGCCCAAAC TGATAAGAAA GATTGCCCTT ACTGCGCTAC CCAAATACCC TTGAAAGCCA GTAAATGCCC TTACTGTACT TCAGAGCTTA TGTAG
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Protein sequence | MFKEFKIFIM RGNVVDLAVG IVIGAAFGAI VNSLVKDVLM PPIGLLLGNV DFGNLFIVLK EGAIGGPYES LLVAQTAGAV TINYGVFINA LINFLILAMA IFFFVVRPLN QLAARQKSKE AVIPAQTDKK DCPYCATQIP LKASKCPYCT SELM
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