Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1194 |
Symbol | |
ID | 5131511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 1169176 |
End bp | 1169454 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640530119 |
Product | protein translocase subunit yajC |
Protein accession | YP_001214651 |
Protein GI | 147669833 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00219424 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGC AGACTATCAC GATGTTTGTT TTACTGGCTC TTTTCTTTGG TATGTTCTAC TTTCTTATCA TCAGGCCGCA ACGCCAGCGT CAAAAGGATC ATGCCAATCT TATGTCATCA ATTGCCAAGG GTGACGGCGT TATTACTATA GGCGGTATTC ACGGGGTGAT AGAATCTGTA GCTGAAGACA GCGTAGTTAT CAAAGTAGAG TCAGGCACTC TGCTTAAGGT TTCCAGAGGT GCTATCGGTT TTAAAAAATC CCCCGAAGAT AAAAAGTAA
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Protein sequence | MDQQTITMFV LLALFFGMFY FLIIRPQRQR QKDHANLMSS IAKGDGVITI GGIHGVIESV AEDSVVIKVE SGTLLKVSRG AIGFKKSPED KK
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