| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1171 |
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| Symbol | |
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| ID | 5131775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1147261 |
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| End bp | 1148376 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640530096 |
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| Product | twitching motility protein |
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| Protein accession | YP_001214628 |
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| Protein GI | 147669810 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000567965 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTA TAAAACTCAT CTACGAAGCC GAAGAGAAAA AAGGATCAGA CCTTCATCTG
GTAGCCCAAA GCCCGCCGCT GGTTCGGGTA AGGGGCGACC TGGAGGCCTT GAATGGTTAT
GAACAACTTC AACCGGCAGA TATCAAAACC GCTTTTGAGC AACTGACCAC CCACGAAGAG
CGCGAAACCT TTTACCAAGA GTGGGAGCTG GATTTCGGTT ATTCACTGGA CGGAGTGGGA
CGATTGCGGT GTAATGCCGC TATGCAAAGG GGGGCTATCA GTCTGGCTAT CCGCCTCCTC
CCGCCCAATA TACCGACTAT TAGTGAACTG GAACTACCGG ATATATGCCA GAAACTGGTT
ACCAAACCCC GTGGCTTGGT GATAGTTACC GGCCCTACCG GCAGCGGCAA GAGCACTACT
CTGGCGGCCA TGATACAGCA CCTGAACAAC ACCGAGAGCA AACACGTGGT GACTATTGAA
GACCCCATTG AATATGTTCA CCCCTGTATA AAATGTGCCG TTACCCAGCG TCAGCTTGGT
TCGGATACGC TTTCCTTTGG GCATGCCCTG AAGCATGTAC TCCGCCAAAA CCCTGATGTG
ATAATGGTGG GAGAGATGCG TGACCTGGAT ACAGCCGCCG CTGTGCTGAC CATTGCCGAA
ACAGGCCATC TGGTACTCTC CACCTCCCAC GCACCCAGTG CCTACCAGGC ACTGGAGCGG
ATTATAGACC TGTTCCCTCC CCATGAAAGG CATTTGGCCC AGACCCGTTT GGCTTCGCTG
ATTGAGGGTG TGCTCTGCCA GACCCTGATA CCCCGCTCAA ACACCGATGG ACGGATAGTG
GCGGTGGAAA TAATGCTGGG AAGCCCAGCA GTCAGAAACC TTATCCGCGA GGGCAAGTTT
TACCAGCTGC CGAATGTTAT CCGCACCAGC CATGACGAGG GCATGATAAC CATGGATGAA
GCTCTGGTGG AGCTGTACCG CCAGCAGGTA ATCAGCCGTG AAAATCTGTT TAACTACTGT
CAGGACGCGT CAGAAGTGGA AAAGCTGATA AGCAGCAGCC CCAGCAGCCA GAAGCGGAAA
AAACTTATGG AAAACAGCAA GAGCCTGCTC TTCTAG
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| Protein sequence | MDVIKLIYEA EEKKGSDLHL VAQSPPLVRV RGDLEALNGY EQLQPADIKT AFEQLTTHEE
RETFYQEWEL DFGYSLDGVG RLRCNAAMQR GAISLAIRLL PPNIPTISEL ELPDICQKLV
TKPRGLVIVT GPTGSGKSTT LAAMIQHLNN TESKHVVTIE DPIEYVHPCI KCAVTQRQLG
SDTLSFGHAL KHVLRQNPDV IMVGEMRDLD TAAAVLTIAE TGHLVLSTSH APSAYQALER
IIDLFPPHER HLAQTRLASL IEGVLCQTLI PRSNTDGRIV AVEIMLGSPA VRNLIREGKF
YQLPNVIRTS HDEGMITMDE ALVELYRQQV ISRENLFNYC QDASEVEKLI SSSPSSQKRK
KLMENSKSLL F
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