| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1170 |
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| Symbol | |
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| ID | 5131281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1145787 |
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| End bp | 1147244 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640530095 |
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| Product | Tfp pilus assembly protein ATPase PilM-like protein |
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| Protein accession | YP_001214627 |
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| Protein GI | 147669809 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00808217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA CAACGACGCT ATACATAGAA GATGCCGAAA TAAAGGTCCT TGTAAACAAT
GGTAAAAAGA TAGAGAAATG GGCGAGCTCC CCTCTTGAAA CCGGTCTGGT TATTGACGGA
TTAATTCAGG ACGAAACCAA GGTATCTGAA GCAATAAAAA CTCTGTTTAG CCGTGAGAAA
ATACCGGCAG GCAGAGTTGT GGCGGCTATG AGCGGTCTTA AATCTATCTT CCGTATTGTT
ACCTTGCCTG CCGTACCTAA AAACATACTG GACGAGGCTA TTAAAAATGA AGCTAACCGG
GTAATTCCCA CCCCCATGGA CCAGAATTAC CTGTCCTACC AGATATTGCC CTCCGCTCAG
AGCGAAACCA AAGTATTTAT CGTAGCCCAC CCTAAAAATA CTACTGATTC TGTAGTAAGA
ACGATAAACA AAGCCGGGCT AAGGCTGGAA GTGCTGGATA TTGCCCCGCT GGCTCTTTGC
CGTTGTGCCA ATCTGGAAAA GGTTATTATT GTAAGCAACT GGCTGGATAA TGTGGATATT
GCCATTATTA TAGACCGCAT TCCACAGGTT ATCCGCAGTC TGTCACTCCC GATTGAAAGC
CAGTCTCTAG CCGAGCGGAT AAGCACCATT GCCGAAGAAT TGGCCAGAAC CATAACTTTT
TATAATTCCA GCCATGCAGA AAGCCTGCTG GATGAAAGCG TACCGGTATT AGTCTCTGGT
GAGCTGGCAA AAGAACCGGA TTCATGGCCT TTACTGCTAG ACGAACTGAG CAATCAGATT
TCCATCCTGC CCTCTCCCTT TGTTGCCAGC GAAGACTTTG ACCCCAGTGT TTATATTGTA
AATATGGGTA TGGCAATTAG AGAACTGCCT GCCGGTACAG ATAACCATAA TTCGCTAATC
AACTTTAATG CCATGCCGGG TTTTTATAAA CCCAAAGGCA CTTCCCCGGC AGCTATCTTG
GTTCCCACTG TAATAGTTCT GCTGGTGGGC GGCCTTGTTT GGGGCTGGTT TTATATTGAT
GATATGAAGC AAAAGAATAA TACATTGGAA CCGCAAGTAC AGGTGCAGGA AACTGCTCTG
ATACAAAAAC GGGCGGAACT CTCCGCTATT AATATCCAAC TTAGCAACAC CCAGAAATCA
CTGACCGGCA TTGAACCGGT AGTAACAGTG CTAAATGATA TGCTCTGGGA TATGTACCAG
GGACGGGAAA CAATTACCGG CGACTATAAA GCCATTTATA ACCTGCATTC CAGCAATATC
GGGCTTTCTG CTGTCAATTT TGATGGTGAA AGCATTACCG TCACAGGTTA CGGCCTGACC
AAAACGGCTG TACTGGAATA TGCCGGTATA CTCCGAGGCA GCAACCGCTG GCTGGACGTA
GTAGTGATTA ATATGGAAAA AGTTCTACTG GATGACCAAC TCACATCCAT ATATAGTTTT
GAATTCCTTT TAAAATAA
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| Protein sequence | MAKTTTLYIE DAEIKVLVNN GKKIEKWASS PLETGLVIDG LIQDETKVSE AIKTLFSREK
IPAGRVVAAM SGLKSIFRIV TLPAVPKNIL DEAIKNEANR VIPTPMDQNY LSYQILPSAQ
SETKVFIVAH PKNTTDSVVR TINKAGLRLE VLDIAPLALC RCANLEKVII VSNWLDNVDI
AIIIDRIPQV IRSLSLPIES QSLAERISTI AEELARTITF YNSSHAESLL DESVPVLVSG
ELAKEPDSWP LLLDELSNQI SILPSPFVAS EDFDPSVYIV NMGMAIRELP AGTDNHNSLI
NFNAMPGFYK PKGTSPAAIL VPTVIVLLVG GLVWGWFYID DMKQKNNTLE PQVQVQETAL
IQKRAELSAI NIQLSNTQKS LTGIEPVVTV LNDMLWDMYQ GRETITGDYK AIYNLHSSNI
GLSAVNFDGE SITVTGYGLT KTAVLEYAGI LRGSNRWLDV VVINMEKVLL DDQLTSIYSF
EFLLK
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