Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1167 |
Symbol | |
ID | 5131983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1142347 |
End bp | 1143474 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530092 |
Product | hypothetical protein |
Protein accession | YP_001214624 |
Protein GI | 147669806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000587842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAACT TAATAACTAT AAGCAAGAGG CTTAGAAGCC AGCAGGGTCA AGCGCTGGTT ATCGCCCTTA TATTTCTGGC CATAGGAGCC CTAACCCTGC CCCCGCTGAT GATGCTGATG GGTTCAGCCC TGGTACAGGG TACTACCTTT GAAAACCGGA CTGCCAGCCT TTATGCCGCA GATGCCGGCG TTGAGCAAGC TATCTGGTAT CTGGATCCGG CAAACAGCCC CTTGATATCC GGTGGTTTGC CCATGCATAC AGGAGAAAGC CGAACTCTGC CCGGCATGTC CATAGACGGG CGGACTGTGA GCGTAACTTT AGCCTACCTT GCAGAGGATA CCTACCAGAT TATGTCCACC TCTGTCAGTT CCACTGAAAC CATCAGCATA ACTACAGTGG TAGGTGAAAC CTTTAACAAC TATACCGACA TAATGACTCA TGTCATTACC TCACAAGGGG ACTACACTAT TCAAGGCGGC CAAGCCAGCG TAACCCCTGA TACAGGCGAT AACGCCCCCA TAGCCAATTA TGATGGTCCA TGGCCGGGTG CAAATGAGTT ATCTGCTTTT TATTATGTAA ATACTACCCC ATATGCTTCA GCCACCCTAA ATTTGACAAA CTATCCAACC GGCGTTCCCG AAATACTAAG ACTGGGGACA CTTGATATTG TGGCTACAGC GAATGCCGTC TATACGCTTG AAGGTGATAT ATACATCACG GGTGATACCC TTATCGGCAT GACTGGTTCA AACTTCACTC TGGACTTAAA CGGCCACTCT ATATATGTGA AAAGCAATAC AGCCGGAAAC CAATATGCCC TTCGTATTGG AGGGAAATGC ACCCTGATTG GATCAGGAAG CATCATTGCC GAAGGTAACA TAGAGTTTAA ACCCAATCTG GCCACCAACC TGAGTGATTA TGTATTTGTC CTTTCGGTAA ACGGTAAAAC CTATATGCAA CCTAATGGTA ATTTTTACGG TACTCTGGCA GGCTCAACCG AAGTGTATCT CCAGAACGGC TCAGTTACCT ATTCCAGCCC GTTTGATGAG TACGGAAACT ACAAAATAGA TTTTCCCGGC AGCGGTCTCA GCCACTTCTG GGGGATAATA ACCTGGAGCA TTAGCTAA
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Protein sequence | MRNLITISKR LRSQQGQALV IALIFLAIGA LTLPPLMMLM GSALVQGTTF ENRTASLYAA DAGVEQAIWY LDPANSPLIS GGLPMHTGES RTLPGMSIDG RTVSVTLAYL AEDTYQIMST SVSSTETISI TTVVGETFNN YTDIMTHVIT SQGDYTIQGG QASVTPDTGD NAPIANYDGP WPGANELSAF YYVNTTPYAS ATLNLTNYPT GVPEILRLGT LDIVATANAV YTLEGDIYIT GDTLIGMTGS NFTLDLNGHS IYVKSNTAGN QYALRIGGKC TLIGSGSIIA EGNIEFKPNL ATNLSDYVFV LSVNGKTYMQ PNGNFYGTLA GSTEVYLQNG SVTYSSPFDE YGNYKIDFPG SGLSHFWGII TWSIS
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