Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1165 |
Symbol | |
ID | 5132056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1141310 |
End bp | 1141765 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640530090 |
Product | hypothetical protein |
Protein accession | YP_001214622 |
Protein GI | 147669804 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.439342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAA AGCTGCTCAG GCGTCAGAAG GGATTTTCCC TGATTGAAGT GTTGATTGCC CTGGCTCTAA TAGGCCTGAT AGGCGTGGCT TTTCTGACTG CCCTTAATAC GGCCGTAAAA GCGGTATCTA TAGCTAACGT ACGCACTACT TCTGAAAGTT ACGCCAAGAG TACCATGGAG CAGCTGAAAA GCTTTTCATA CCTTAAAGCT ACAGATGGCT CAGTAGCGGA TTATGTATTC CTAAGCCCGT CTGATACCAC TTTCACTATC TGCACTTATA ACCGTGATGG AAACCTGATA CAAAACAAGA TTTACGGTAT ACCCTGGGAT GTAGTTACCA ATACCCAGAG TATTACTGAT AAAGGTATCC AGAAGATAAC CATAGTAATA CAGCACAATG AGGGTGGGGT AAACAAGATT ATCTTTACCC TGATAGATTA TGTGACAAAG AGATGA
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Protein sequence | MRRKLLRRQK GFSLIEVLIA LALIGLIGVA FLTALNTAVK AVSIANVRTT SESYAKSTME QLKSFSYLKA TDGSVADYVF LSPSDTTFTI CTYNRDGNLI QNKIYGIPWD VVTNTQSITD KGIQKITIVI QHNEGGVNKI IFTLIDYVTK R
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