| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1164 |
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| Symbol | |
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| ID | 5131419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1140092 |
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| End bp | 1141297 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530089 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001214621 |
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| Protein GI | 147669803 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA ATTACGTAGC TTATGGGCAG GATAAAAGGC TTGTAAAGGG GAAAATCCCG
GCTACCTCTA TGGAAGCAGC CCAGAGACTG CTGAGTCACA GCGGTTACCA GATTTTAAGC
ATCAAACCCC TTACACCTTT TTTCAATACA GCCGGTTCGT TTAACTTCTC AAAGGTAAAA
CCCAGAGAAG TTATTCTGTT TTCCCGCCAG CTGGCTTTAC TGCTGGAATC CGGCACGGAT
ATTGTGACTT CTCTGGAACT TCTGCAGGAA CAGACTACCA ATAAACTTTT CCGCGAGATT
ATCGGCGAGA TTGTAAATGA TATCCGGGGA GGCAGTTCGC TTTCTCTAGC CATGAGCAAA
CACCCCAAGG CTTTCCCTCC TCTGTACCAC AGGGTAATCG CTGCCGGCGA ACAAGGAGGC
AGCCTTGAAG TAGTGCTTCG GAATCTGGCT AGCTTTGTAC AGCGAAACGT AGAAACTGAA
AAGAAGGTTA AAAGCGCACT GACTTATCCC GGTGTAGTTG CCGTGGTAGG TATTCTGGTG
CTGCTGCTTA TGGTCACATT CGTATTGCCG GCTTTTACCA GTCTATACTC CCAGATGGGT
ACTGAACTGC CCACCCCAAC CAGAATACTT ATAGGCCTGA GTGACTTCTT TGAGTCATGG
GGTCTATATG TGATTGGGAT TTTCATAATA GCGGTAACCG CACTGGTGAT TTATATGCGC
ACACCCATGG GGCGATACCA TAGAGACCGC ATAGCTCTGA AACTGCCTGT GATCGGGCGG
ATTCTGCTCC TTTCAGAACT TTCACGCGCC TGCCAGACCA TGTCGTTGCT GTTTAAAGCC
GGCCTCCCTT TGCCTGAGAT TATGAACCAA GCCACCGCTG CAGCAAACAA CAAACTTATC
AGCAATGCAC TGGCAGATGT ACAGCATGAC CTGATAAGGG GTGAGGGACT TTCCCGTCCC
ATGACTAAAA ATCCCCTCTT TTTACCCATG ATGGTTCAGA TGGTAAGCGT GGGTGAGGAA
ACCGGTAAAC TGGACGACAC CTTGGCTACC GTATCCGCCA CTTATGATAC TGAGACCGAT
GACCGCATAA GTGCGGCTAT TGGCATGATA CAGCCTGTTA TGACGATAGC TATCGGTCTG
GTAGTAGGCT TTATTGCCGT TGCCCTGGTA TCTTCCATGT ACTCTTTGTA CGGGCAAATA
GGCTAA
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| Protein sequence | MDFNYVAYGQ DKRLVKGKIP ATSMEAAQRL LSHSGYQILS IKPLTPFFNT AGSFNFSKVK
PREVILFSRQ LALLLESGTD IVTSLELLQE QTTNKLFREI IGEIVNDIRG GSSLSLAMSK
HPKAFPPLYH RVIAAGEQGG SLEVVLRNLA SFVQRNVETE KKVKSALTYP GVVAVVGILV
LLLMVTFVLP AFTSLYSQMG TELPTPTRIL IGLSDFFESW GLYVIGIFII AVTALVIYMR
TPMGRYHRDR IALKLPVIGR ILLLSELSRA CQTMSLLFKA GLPLPEIMNQ ATAAANNKLI
SNALADVQHD LIRGEGLSRP MTKNPLFLPM MVQMVSVGEE TGKLDDTLAT VSATYDTETD
DRISAAIGMI QPVMTIAIGL VVGFIAVALV SSMYSLYGQI G
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