Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_1146 |
Symbol | gatA |
ID | 5131642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 1124861 |
End bp | 1126321 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640530071 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001214603 |
Protein GI | 147669785 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATT TAGTTAAACT GACTATTGCC CAGTCCCACA AGTTGCTCAA AGACCACAAG ATATCATCAG CCGAACTTAC CAAAGCCCAC CTTGAGCGGA TTGAGAAACT TGAACCTGAA ATAAAGGCCT TTATGACTGT TTGCCCGGAA ACCGCCCTGT CACAGGCTGA AGCGGCAGAC AAAGCTATCA AACAGGGGGA TATCCGCCCT CTTACGGGTA TACCCATGGC CCTGAAAGAC GTACTATGCA CCAAGGGCAT CCGGACTACC TGTTCATCTA AAATGCTGGA AAACTTTGTA CCCCCTTATA ACGCCCACGT GGTGGATAAA CTGGCGAAAG AAGGGGCGGT TTTGCTGGGT AAAACCAACA TGGATGAGTT TGCCATGGGT TCTTCCACTG AAAACTCAGC CTACTTTACC ACCCGCAACC CATGGAATAC CGATAAAGTT CCCGGCGGTT CTTCGGGCGG TTCGGCAGCC TGTGTGGCCG CTTCAGAAGC TGTATTTTCA TTGGGTTCGG ATACCGGCGG TTCTATCCGC CAGCCGGCCA GCTTCTGCAG TGTTACCGGG TATAAACCCA GCTATGGCAT GGTAAGCCGC TACGGGCTGG TAGCCTTTGC CAGCTCACTT GACCAGATAG GGCCTTTTAC CAAAGATGCA ATGGATTGCG CTTTGGTAAT GAATGCCATT GCCGGCTTTG ACGACCGTGA CTCCACCTCT GTCCCGCAAA CTGTTCCTGA TTTCAGCAGC GGCCTTGACG GGAATATAAA GGGGTTTAAG CTGGGTGTGC CCAAAGAATA TTTCAGCCAG AATATGCGGC CGGATATCAC CGAAAAGATA AATGACGCCC TGGGCGTACT TTCGGGTCTG GGTGCAAGCA TAGACCGCGA GGTATCTCTG CCCCACACTC CATACGCACT GGCAGTTTAT TACATACTGG CGCCCTCTGA AGCATCCGCC AATCTGTCAC GCTATGACGG GGTAAAATAC GGCTACTCTT ACAATCCAAC CGAAAACATG TGGGAAGCGA TGGAAAAAAC CCGTGCCAAA GGTTTCGGGC CTGAGGTGAA ACGCCGCATT ATGATAGGTA CTTATGCTCT TTCTGCCGGC TATTATGACG CATGGTATGT CAAAGCCCAG AAGGTACGCA CTTTGATAAG CCAGGAATTT AACAACGCCT TTGAAAAGTA TGACGCCCTG ATAACCCCAA CCACTCCCAA CCTACCCTTC AGTATCGGTG AAAAACTGAA TGACCCTTTT GAGATGTATA TGTGTGACAC CTGCACCATT CCCATAAATA TTGCCGGCTT GCCCGCGGTA AGCATACCGG CTGGTTTCGT AGATGGTTTA CCGGTTGGTT TACAAATTAT AGGCAAGCCC TTTGCTGACC AGACTACCAT GCGCATAGCT CATGCTTTCC AGTGCGCTAC CGCCTGGCAC AAGGAAACGC CCCGGTTATA G
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Protein sequence | MTDLVKLTIA QSHKLLKDHK ISSAELTKAH LERIEKLEPE IKAFMTVCPE TALSQAEAAD KAIKQGDIRP LTGIPMALKD VLCTKGIRTT CSSKMLENFV PPYNAHVVDK LAKEGAVLLG KTNMDEFAMG SSTENSAYFT TRNPWNTDKV PGGSSGGSAA CVAASEAVFS LGSDTGGSIR QPASFCSVTG YKPSYGMVSR YGLVAFASSL DQIGPFTKDA MDCALVMNAI AGFDDRDSTS VPQTVPDFSS GLDGNIKGFK LGVPKEYFSQ NMRPDITEKI NDALGVLSGL GASIDREVSL PHTPYALAVY YILAPSEASA NLSRYDGVKY GYSYNPTENM WEAMEKTRAK GFGPEVKRRI MIGTYALSAG YYDAWYVKAQ KVRTLISQEF NNAFEKYDAL ITPTTPNLPF SIGEKLNDPF EMYMCDTCTI PINIAGLPAV SIPAGFVDGL PVGLQIIGKP FADQTTMRIA HAFQCATAWH KETPRL
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