| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1142 |
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| Symbol | |
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| ID | 5131301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1123023 |
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| End bp | 1123799 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530067 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001214599 |
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| Protein GI | 147669781 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGCCAGC GGGGCGGCAC CGTTATCCCG TATTTAAGCG GCATTTTCAA GAGAGGTGTC
AAAATAGAGA TAATTCCGGC AATAGATATT TTAGGTGGAA GGTGTGTTCG CCTTTTTCAA
GGTGATTATG CTCAGGAGAC AGTGTATTCG TCTGATCCGG TGGGTACAGC CATGCGCTGG
CAGTCGCTGG GTGCTCCCCG CCTGCACGTG GTGGATTTAG ATGGTGCTGC TGATGGACAA
AGCGTAAACT TTGAGCTTAT AAAAGAAATA GCCAACTCCG CTCTTATACC GGTGGAAGTG
GGCGGCGGTA TCCGCAGTAT GGAGACGGTA AAGAAACTGC TTGTAGCCGG GGTTGACCGG
GTAATACTGG GTACGGCGGC AGTGGAAAAC CCTGAACTGG TTAAAGAAAT ATGTGCCAGA
TATGCTGACT CTGTAGCCGT CAGTATAGAC GCAAGGAACG GCAAGGTGGC AACCCGGGGC
TGGGTCACCA ATACAGAAAT AGATGCTTTG GAACTAGCCC GAAGTATGAA AAAACTGGGC
ATCAGGCGTT TTATTTATAC CGATATTAGC CGTGACGGCA CCCTAAGCGA ACCTAATTTT
GCGGCTATAC GTGACCTTAT TTCAGCTATC AATGTACCGG TTATAGCCTC CGGTGGTGTT
TCCAGCCTGA GCCACTTACG TCTTCTCAAA GATATAGGTG CAGAAGGCGC TATTGTGGGC
AAGGCCATAT ACACCGGTGA CCTGAATCTT AAGCGGGCAT TTGAAGATCT GTCCTAG
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| Protein sequence | MCQRGGTVIP YLSGIFKRGV KIEIIPAIDI LGGRCVRLFQ GDYAQETVYS SDPVGTAMRW
QSLGAPRLHV VDLDGAADGQ SVNFELIKEI ANSALIPVEV GGGIRSMETV KKLLVAGVDR
VILGTAAVEN PELVKEICAR YADSVAVSID ARNGKVATRG WVTNTEIDAL ELARSMKKLG
IRRFIYTDIS RDGTLSEPNF AAIRDLISAI NVPVIASGGV SSLSHLRLLK DIGAEGAIVG
KAIYTGDLNL KRAFEDLS
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