| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1110 |
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| Symbol | |
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| ID | 5131066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1100316 |
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| End bp | 1101722 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530035 |
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| Product | general substrate transporter |
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| Protein accession | YP_001214568 |
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| Protein GI | 147669750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA CATCTAGCCC CCCCACTCCC AAAGGCATAT GGAAGGTAAT ATTTGCCTCC
TCTGCCGGGA CGGTTATAGA ATGGTACGAC TTTTACATCT TCGGTGCTTT GGCTACTACT
CTAGCCAGCA AGTTCTATAA TACCGGCACT CCCATTGGCG ATATTATCGC TTGGCTGGGC
ACGTTTGCCG TCGGTTTTCT GGTTCGCCCG TTCGGTGCTA TAGTTTTCGG CCGGATAGGT
GATCTGGTTG GCCGCAAATT TACTTATCTT ATTACTATTA CCATCATGGG CTCATGCACC
TTCCTCATCG GTTTGTTACC CACCCAGGAC GTGCTGGGCG CCTGGGCCGG CATTATCCTT
ATAACAATGC GTATTCTTCA GGGTCTGGCT TTGGGTGGCC AGTACGGCGG CGCGGCTACA
TTTGTGGCTG AGCATGCTCC TCAGGGGAAA CGCGGTTTCT ATACCAGCTG GATTCAGACT
ACAGCAACCT TTGGTTTGCT TATTTCTCTG GGTGTCATCT TAATCACCCG TATAAGTCTG
GGAGAAGCAG ACTTCAACGA ATGGGGCTGG CGTCTGCCTT TCATGGCTTC CATATTGCTG
GTAATCCTGT CACTCTGGAT ACGCAGAGCC TTAAAGGAAT CACCTCTGTT CCAGCAACTC
AAGGATACCA AGGCTGTTTC AAAAAACCCG CTCAAGGAAA GCTTTGCCAA TCCTTATAAC
CTGCGCTGGG TTTTAATAGC CCTGTTCGGG GCTACCATGG GTCAGGGTGT GGTCTGGTAC
ACAGGTCAGT TCTATGCCCT GTTCTATCTC CAAAAAATCT TTAACACCCC GCTAATTGAT
TCTAATCTTA TAGTCGGTGC AGCTTTGCTA CTGTCAATGC CTTTCTTTAT CTTCTTCGGG
TCTCTTTCAG ACCGAATAGG ACGAAAAAAG GTAATGCTTT CCGGTATGCT GCTGGCAGTG
CTGACTTACT ATCCGATTTA TGGTCTGATG GCGGCATTTG CGCCTACTGA CCCCGGACAG
CACTTCCTGT TTGCTTATAT AGGCTACAAT CCTGTTATAC TGGGTCTCTT GGTATTTATC
CAGGTGATTT ATGTAACCAT GGTCTACGGG CCTATTGCCG CCTTCCTAGT GGAGTTATTC
CCCACCAAGA TACGTTACAC ATCCATGTCT CTCCCTTACC ATATAGGTAA CGGTGTCTTC
GGTGGTTTAG TGCCTATGAT AGGCTTGATA CTTATCAATG CCACAGGCAA TGACTTCGCC
GGACTGTGGT GGCCTATGGC TATTGCAGGC ATCTGTTTGG TAGTGGGTTT CCTGCTTATT
AAGGAGACCA ACAAGGTGGA TATATCTGAC GCTTCCACTT CAATCTCGGT TAAACACGAG
GCTGATAAAC GGGCATTGAA TAAATAA
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| Protein sequence | MMQTSSPPTP KGIWKVIFAS SAGTVIEWYD FYIFGALATT LASKFYNTGT PIGDIIAWLG
TFAVGFLVRP FGAIVFGRIG DLVGRKFTYL ITITIMGSCT FLIGLLPTQD VLGAWAGIIL
ITMRILQGLA LGGQYGGAAT FVAEHAPQGK RGFYTSWIQT TATFGLLISL GVILITRISL
GEADFNEWGW RLPFMASILL VILSLWIRRA LKESPLFQQL KDTKAVSKNP LKESFANPYN
LRWVLIALFG ATMGQGVVWY TGQFYALFYL QKIFNTPLID SNLIVGAALL LSMPFFIFFG
SLSDRIGRKK VMLSGMLLAV LTYYPIYGLM AAFAPTDPGQ HFLFAYIGYN PVILGLLVFI
QVIYVTMVYG PIAAFLVELF PTKIRYTSMS LPYHIGNGVF GGLVPMIGLI LINATGNDFA
GLWWPMAIAG ICLVVGFLLI KETNKVDISD ASTSISVKHE ADKRALNK
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