Gene DehaBAV1_1109 details

Gene Information

• Locus tag: DehaBAV1_1109
• ID: 5131134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 1098230
• End bp: 1100098
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640530034
• Product: small GTP-binding protein
• Protein accession: YP_001214567
• Protein GI: 147669749
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0657709
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGCCCTT GTATCCAGGC TATTTTCAGG AGAAAGATTT TGGAAAACTA CCAGAGAACC 
GACATTCGTA ATATTGCTAT TATTGCCCAC GTAGACCACG GCAAAACCAG CCTGGTAGAC 
GTGATGCTTA AACAAAGCCG CATTTTCCGT GAGAACCAGC ATGTGGGCGA ACTGATTATG 
GACCGCAACA CTCTGGAACG GGAAAAAGGC ATTACTATTC TGGCTAAAAA CACGGCTATC 
ACCTACCGCG GAGTAAAAAT AAATATTATA GATACTCCCG GACATGCTGA CTTTTCGGGT 
GAAGTTGAGC GGGTGCTGAA TATGGCTGAC GGCTGTCTTT TGGTGATTGA CAGCATTGAC 
GGCCCCATGC CCCAAACCCG TTTTGTACTT AAGGAAGCCA TGCAGAAAAA ACTGAAGCCT 
ATCGTAGTTA TAAACAAGAT TGACCGCGAA AATTCACGCC CCGAAGTAGT GCTTGGACTG 
GTACAGGACT TGTTTCTGGA ACTGGCCACT ACTGAAGAAC AGCTGGATTT CCCGGTGGTT 
TATACCTCTG CCCGCGAGGG TTATGCCGTT AACACCCCCG GCACCAAGAA TACTGATTTG 
GTACCCCTGT TTGAGTGCAT ACTTTCCAAA ATCCCCCCGC CCAGCATTGC CCAGGGTGAA 
TTCCAGATGC TGATTTCCAA CCTGGATTAT GATACCCATA AAGGCAGGAT AGCTATCGGG 
CGCATTCAAC GGGGCAAAAT ATGCTCCCGT GACCGGATAG TTAATATAGA CTCCCAAAAT 
AAGGCTCATT CTTTTGAAGT AGGTCAGGTA TTTACCTTTA TGGGACTTGG CAAGCAGGAA 
GTTGAATGTG CCGAGGCGGG TGAAATTGTG GCCATTACCG GTCTGGAAAA TGCATCTATA 
GGTGATACCG TTACCAGCCC GCTCCAGCCT GAAGCCCTGC CCCGTATTGA GATAGGTGAA 
CCCACAGTCA GAATGACTTT CGGGGTAAAT ACCTCCCCTT TCGGCGGGCG GGACGGCAAA 
TTCTGTACTT CACGCCAGCT TCGGGAAAGA CTTTACCGTG AGCTTGAGAC TAATATCGGA 
CTGAGAGTGG AAGAAACCGA TTCCCCGGAC TCGTTTTTGA TTTCCGGACG GGGTGAACTG 
CATCTGTCCA TACTGGTAGA AACCATGCGC CGTGAAGGAT ATGAATTTGA AATATCCAAA 
CCGGAGGCCA TTACCAAGAC TATTGACGGC AAAATCCATG AACCGGTGGA AGCTTTGACT 
ATAGATGTCC GCGAGGATTT TGTAGGTGAG GTTACCGAAC TTCTGGGTAA GCGGCAGGCA 
CGCATGACTG ACATGCATAA TGACGGCGAA GGAAACGTAA GGCTGGAATA CAATATCCCC 
ACCCGCGGTC TTATCGGCTT CCGCAACTCG TTCCTGACGG CTACCAGAGG CACAGGCGTA 
CTTAACAGCC AGTTTCTGGA GTTTCAACCC TGGTGCGGCG AAATAGAACA AAGCCGAACC 
GGCGCACTTG TAGCGGCTGA AGCAGGATTA TCCTGCACTT ACGGCCTGAG CAATTCGCAG 
GAACGGGGTA TAATAATGAT AGATGCCAAT ATACCCGTTT ATGAAGGCAT GATTGTCGGA 
CTGCATGCCA GAGGCCTTGA CTTGGCTGTG AATGTCTGCA AGCAGAAGAA AATGACCAAT 
ATCCGTTCCT CAACCTCGGA TATTGCCATC AAACTGGTGC CACCCCTCAA ACTTAGCCTT 
GAGCAATCTA TGGATTTCAT CGCTGATGAC GAACTGGTTG AGATAACTCC CAAGGGTATC 
CGCCTGCGCA AGAAGATACT CAATACCGAC CTGCGGCTTC GGGCACGCAA ACGCACTGAC 
AACAATTAA 

 

Protein sequence

MCPCIQAIFR RKILENYQRT DIRNIAIIAH VDHGKTSLVD VMLKQSRIFR ENQHVGELIM 
DRNTLEREKG ITILAKNTAI TYRGVKINII DTPGHADFSG EVERVLNMAD GCLLVIDSID 
GPMPQTRFVL KEAMQKKLKP IVVINKIDRE NSRPEVVLGL VQDLFLELAT TEEQLDFPVV 
YTSAREGYAV NTPGTKNTDL VPLFECILSK IPPPSIAQGE FQMLISNLDY DTHKGRIAIG 
RIQRGKICSR DRIVNIDSQN KAHSFEVGQV FTFMGLGKQE VECAEAGEIV AITGLENASI 
GDTVTSPLQP EALPRIEIGE PTVRMTFGVN TSPFGGRDGK FCTSRQLRER LYRELETNIG 
LRVEETDSPD SFLISGRGEL HLSILVETMR REGYEFEISK PEAITKTIDG KIHEPVEALT 
IDVREDFVGE VTELLGKRQA RMTDMHNDGE GNVRLEYNIP TRGLIGFRNS FLTATRGTGV 
LNSQFLEFQP WCGEIEQSRT GALVAAEAGL SCTYGLSNSQ ERGIIMIDAN IPVYEGMIVG 
LHARGLDLAV NVCKQKKMTN IRSSTSDIAI KLVPPLKLSL EQSMDFIADD ELVEITPKGI 
RLRKKILNTD LRLRARKRTD NN