| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1104 |
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| Symbol | |
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| ID | 5131100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 1093402 |
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| End bp | 1094586 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640530029 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001214562 |
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| Protein GI | 147669744 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG AAGAACTTTT TCATTTATTT TTAGATAATA TGCTGGATGC AGTGGCGGTC
TATGAAGTCT CTCCGGAGGG AAAGCCGGTA AAATTCATGG AAGCCAATGA GCAGATGTGC
CGTTATATCG GCTATACCCA TGAAGAATTT CTGGACTTAG TGACTGTTGA TGTTAATTTT
GAAGGTTTCA ATATTAACCA GACCTTATGG TTGGAGCTGC GGGAAAGCCG TTATCTATTG
AGTGAGTGTT TACACAAAAC CAAAGATAAT ATATCTGTCC CTATAGAAAT ACATTATCAT
CTATTTCAAC TGGAGGGCAG AAATATAGTA TTTACAACCA TTCGGGATAT TTCTGAACGC
AAAAAAGCAG AAGAGAATCA GCGGAGATTG GAAAAAGACC TTAATCTTTC CAGCCGCTTG
GCTTCGGTAG GTGCGCTGAC AGCCGGTGTT GCCCACGAAA TAAACAGCCC TCTGACCAGT
ATACTGGGCT TTTCGGAAAG GCTGGCCCGA AAATGCACCA GTGAAGAACA ACACCGGGAT
ATTGAACGTA TACATACAGA AGCTTTGCGG GCAGCTAAGG TAGTAAATAA CCTGCGAACA
TTTGCCCGCA GTTACGAACA GGAAAAGAAA CTGTGCGGGC TTAATGACAT TATCCGCAAA
TCTATAGAGC TGCGTGAGTA TGAGCTGGTT ATTCAAAATA TTGTGGTGGA ACTGGATCTG
GCAGAAAATC TGCCGGCTAC CCTGATGGAT TTCTACAAGA TACAGCAGGT GCTGATAAAT
ATGATTCTTA ATGCCGAACA AGCCATGTAT CAGGCTCACG GGCGGGGCAG GTTGCTTATT
AAAACTGAAG ATATGGGCAA TTTTATCCGC ATGATAATAG AAGATAATGG TCCGGGTATT
TCACCTGAGA TTGCCGAAAG GGTATTTGAC CCCTTTTTTA CCACTAAGGA AGATAGCTGG
GGTACGGGAT TGGGACTGAG CGTGTGTTAC GGTATCATTA TGGAACATGA CGGCAAAGTT
CAGTTGGAAA GTAAGCTGGG GCAGGGAACC AGATTTATAA TAGATTTGCC TGTGAAAAAC
AGCAAAATAC CCCAAAGGAA ACCTTCCAAG GTGGTGGTGG TTAAGGTGAA TGCTAAGACC
CGTGCAAAGC CGCCGAAATC TTTGCCTCAA AATCCGCCTG ACTAA
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| Protein sequence | MEKEELFHLF LDNMLDAVAV YEVSPEGKPV KFMEANEQMC RYIGYTHEEF LDLVTVDVNF
EGFNINQTLW LELRESRYLL SECLHKTKDN ISVPIEIHYH LFQLEGRNIV FTTIRDISER
KKAEENQRRL EKDLNLSSRL ASVGALTAGV AHEINSPLTS ILGFSERLAR KCTSEEQHRD
IERIHTEALR AAKVVNNLRT FARSYEQEKK LCGLNDIIRK SIELREYELV IQNIVVELDL
AENLPATLMD FYKIQQVLIN MILNAEQAMY QAHGRGRLLI KTEDMGNFIR MIIEDNGPGI
SPEIAERVFD PFFTTKEDSW GTGLGLSVCY GIIMEHDGKV QLESKLGQGT RFIIDLPVKN
SKIPQRKPSK VVVVKVNAKT RAKPPKSLPQ NPPD
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