Gene DehaBAV1_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_1088 
Symbol 
ID5131906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand
Start bp1078209 
End bp1078961 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content50% 
IMG OID640530013 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_001214546 
Protein GI147669728 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.885603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAACA TGCTTGGTTT AAATGGCAAA GTAGCCCTGA TTACCGGCTC CGGCAGGGGC 
ATAGGCAAAG CCATAGCTTT GCGGTTCGCC GAAGCAGGGG CAAAAGTGGT AGTAAACAGT
CTGTCTCCCA ATGGTGAAGA AACGGCCTCT CAGATACGTT CTCAGGACGG ACAGGCCATA
TTCGTTCAGG CTGATGTAAG CCAAAGTAGC GGGGTAGAAG CCCTTTTCAA AGCCAGCCAG
GAAGCCTTTG GCGGAGTGGA TATACTGGTA AACAATGCCG GCATAACCCG TGACCAGTTG
ACCATGCGTC TGTCCGAAGA AGACTGGGAC AGTGTAATAC AAACCAACTT AAAGAGTGTT
TTTTTGTGTT CCAAGGCCGC CCTCCGCCAG ATGCTGAAAA ACCGCTGGGG ACGGATAATA
AACCTCAGTT CCATAGTCGG TCTGAAGGGC AACCCGGGGC AGGCTAATTA TGCCGCCGCC
AAAGCCGGCA TTCTGGGATT CAGCTATTCT TTGGCTAAAG AAGTGGCCAG CCGCAATATT
ACTGTCAATT CCATAGCACC CGGTTTTATA GAAACCGATA TGACCGCAGC CCTGTCTGAC
GAACAAAGAC AGGCTATAAC AGCCCGAATA CCCATGCAAA AACTTGGCAC AGTGGAAGAT
ATAGCCGCCT GTGCATTATA CTTGGCACAA GAAGATGCCA AATACATTAC CGGACAGGTA
ATTTGCCTGG ACGGCGGTAT GTCTATAATA TAA
 
Protein sequence
MGNMLGLNGK VALITGSGRG IGKAIALRFA EAGAKVVVNS LSPNGEETAS QIRSQDGQAI 
FVQADVSQSS GVEALFKASQ EAFGGVDILV NNAGITRDQL TMRLSEEDWD SVIQTNLKSV
FLCSKAALRQ MLKNRWGRII NLSSIVGLKG NPGQANYAAA KAGILGFSYS LAKEVASRNI
TVNSIAPGFI ETDMTAALSD EQRQAITARI PMQKLGTVED IAACALYLAQ EDAKYITGQV
ICLDGGMSII